Genomics

Dataset Information

0

1f1fc78d-d75f-4695-9721-035052f026b1 - samples


ABSTRACT: Our objective was to establish a liquid biopsy-based monitoring strategy for pediatric high-risk neuroblastomas that are harboring genomic TERT rearrangements at diagnosis. TERT rearrangement breakpoints are detected by a hybrid capture-based neuroblastoma DNA panel sequencing (published in PMID: 34442335) in tumor material and are reflected in cell-free tumor DNA and can serve as robust biomarkers for disease activity. Within the dataset, 5 tumors of 4 pediatric patients with a neuroblastoma were DNA sequenced. Provided are FASTQ data files, bam and bambai files, as well as breakpoint spanning and encompassing read (enspan) bam and bambai files. Sequencing bam data files are aligned to GRCh37.p13 reference genome (processed).

PROVIDER: EGAD00001011088 | EGA |

REPOSITORIES: EGA

Similar Datasets

2018-12-19 | GSE120650 | GEO
2015-03-03 | GSE66422 | GEO
2020-05-12 | GSE133453 | GEO
2015-03-03 | E-GEOD-66422 | biostudies-arrayexpress
| PRJNA321053 | ENA
| PRJEB20905 | ENA
2019-09-16 | E-MTAB-8248 | biostudies-arrayexpress
2022-09-06 | PXD030599 | Pride
2012-09-24 | E-GEOD-18271 | biostudies-arrayexpress
2018-10-25 | GSE120559 | GEO