Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sequencing data for oesophageal / related samples - Kazachenka et al DNA release dataset - samples

ABSTRACT: Data supporting: "The transcriptional landscape of endogenous retroelements delineates esophageal adenocarcinoma subtypes" WGS for 452 samples

PROVIDER: EGAD00001011095 | EGA |

REPOSITORIES: EGA

ACCESS DATA

Json Xml

Similar Datasets

Sequencing data for oesophageal / related samples - Kazachenka et al RNAseq release dataset - samples

Project description:Data supporting: "The transcriptional landscape of endogenous retroelements delineates esophageal adenocarcinoma subtypes" RNAseq for 279 samples

| EGAD00001011076 | EGA

Sequencing data for oesophageal and related samples - Izadi et al release - samples

Project description:Data supporting: "Genomic analysis of response to neoadjuvant chemotherapy in esophageal adenocarcinoma" Izadi et al. WGS for tumour and normal samples. RNAseq for tumour samples.

| EGAD00001007493 | EGA

Sequencing data for oesophageal and related samples - Scott et al release - samples

Project description:Data supporting: "Evidence that polyploidy in esophageal adenocarcinoma originates from mitotic slippage caused by defective chromosome attachments" Scott et al. WGS and RNAseq sequencing data Organoid, tumour and normal samples BAM files

| EGAD00001006738 | EGA

Sequencing data for oesophageal and related samples - Ogden et al release - samples

Project description:Data supporting: "Widespread reorganisation of the regulatory chromatin landscape facilitates resistance to inhibition of oncogenic ERBB2 signalling" Ogden et al. WGS for tumour and normal samples. RNAseq for tumour samples.

| EGAD00001007496 | EGA

Sequencing data for oesophageal and related samples - Ng, Contino et al RNAseq release - samples

Project description:Data supporting: "Interplay of processes shapes structural variations undergoing selection in oesophageal adenocarcinoma" Ng, Contino et al. RNAseq (BAM files) 214 oesophageal adenocarcinoma samples

| EGAD00001007809 | EGA

Sequencing data for oesophageal and related samples - Ng, Contino et al WGS release - samples

Project description:Data supporting "Interplay of processes shapes structural variations undergoing selection in oesophageal adenocarcinoma" Ng, Contino et al. WGS (BAM files) 383 oesophageal adenocarcinoma samples 383 normal samples

| EGAD00001007808 | EGA

Sequencing data for oesophageal and related samples - Foley, Shorthouse et al RNAseq release dataset - samples

Project description:Data supporting: "SMAD4 and KCNQ3 Alterations are Associated with Lymph Node Metastases in Oesophageal Adenocarcinoma" RNAseq (FASTQ files) 6 samples

| EGAD00001011065 | EGA

Sequencing data for oesophageal and related samples - Ganguli et al (sWGS) - samples

Project description:Data supporting: "TBC" Ganguli et al (sWGS for 75 samples)

| EGAD00001011189 | EGA

Sequencing data for oesophageal and related samples - Ganguli et al (WGS) - samples

Project description:Data supporting: "TBC" Ganguli et al (WGS for 1298 samples)

| EGAD00001011191 | EGA

Sequencing data for oesophageal and related samples - Ganguli et al (RNA) - samples

Project description:Data supporting: "TBC" Ganguli et al (RNA for 394 samples)

| EGAD00001011190 | EGA