Genomics

Dataset Information

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Sequencing data for oesophageal and related samples - Abbas et al (WGS) - samples


ABSTRACT: Data supporting: "Mutational signature dynamics shaping the evolution of oesophageal adenocarcinoma" Abbas et al (WGS for 1397 samples)

PROVIDER: EGAD00001011196 | EGA |

REPOSITORIES: EGA

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Publications


Cancer genome sequencing studies have identified numerous driver genes, but the relative timing of mutations in carcinogenesis remains unclear. The gradual progression from premalignant Barrett's esophagus to esophageal adenocarcinoma (EAC) provides an ideal model to study the ordering of somatic mutations. We identified recurrently mutated genes and assessed clonal structure using whole-genome sequencing and amplicon resequencing of 112 EACs. We next screened a cohort of 109 biopsies from 2 key  ...[more]

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