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Exome_array_250K

ABSTRACT: Argentine samples using 250K

PROVIDER: EGAD00010001075 | EGA |

REPOSITORIES: EGA

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Publications

GBStools: A Statistical Method for Estimating Allelic Dropout in Reduced Representation Sequencing Data.

Cooke Thomas F TF Yee Muh-Ching MC Muzzio Marina M Sockell Alexandra A Bell Ryan R Cornejo Omar E OE Kelley Joanna L JL Bailliet Graciela G Bravi Claudio M CM Bustamante Carlos D CD Kenny Eimear E EE

PLoS genetics 20160201 2

Reduced representation sequencing methods such as genotyping-by-sequencing (GBS) enable low-cost measurement of genetic variation without the need for a reference genome assembly. These methods are widely used in genetic mapping and population genetics studies, especially with non-model organisms. Variant calling error rates, however, are higher in GBS than in standard sequencing, in particular due to restriction site polymorphisms, and few computational tools exist that specifically model and c ...[more]

PMID: 26828719

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