Genomics

Dataset Information

0

Imputation analysis file


ABSTRACT: This data set includes the following summary level data file used for the imputation data: imputation.sv.assoc.txt: results from single variant association analysis in imputed samples

PROVIDER: EGAD00010001184 | EGA |

REPOSITORIES: EGA

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Publications

The genetic architecture of type 2 diabetes.

Fuchsberger Christian C   Flannick Jason J   Teslovich Tanya M TM   Mahajan Anubha A   Agarwala Vineeta V   Gaulton Kyle J KJ   Ma Clement C   Fontanillas Pierre P   Moutsianas Loukas L   McCarthy Davis J DJ   Rivas Manuel A MA   Perry John R B JRB   Sim Xueling X   Blackwell Thomas W TW   Robertson Neil R NR   Rayner N William NW   Cingolani Pablo P   Locke Adam E AE   Tajes Juan Fernandez JF   Highland Heather M HM   Dupuis Josee J   Chines Peter S PS   Lindgren Cecilia M CM   Hartl Christopher C   Jackson Anne U AU   Chen Han H   Huyghe Jeroen R JR   van de Bunt Martijn M   Pearson Richard D RD   Kumar Ashish A   Müller-Nurasyid Martina M   Grarup Niels N   Stringham Heather M HM   Gamazon Eric R ER   Lee Jaehoon J   Chen Yuhui Y   Scott Robert A RA   Below Jennifer E JE   Chen Peng P   Huang Jinyan J   Go Min Jin MJ   Stitzel Michael L ML   Pasko Dorota D   Parker Stephen C J SCJ   Varga Tibor V TV   Green Todd T   Beer Nicola L NL   Day-Williams Aaron G AG   Ferreira Teresa T   Fingerlin Tasha T   Horikoshi Momoko M   Hu Cheng C   Huh Iksoo I   Ikram Mohammad Kamran MK   Kim Bong-Jo BJ   Kim Yongkang Y   Kim Young Jin YJ   Kwon Min-Seok MS   Lee Juyoung J   Lee Selyeong S   Lin Keng-Han KH   Maxwell Taylor J TJ   Nagai Yoshihiko Y   Wang Xu X   Welch Ryan P RP   Yoon Joon J   Zhang Weihua W   Barzilai Nir N   Voight Benjamin F BF   Han Bok-Ghee BG   Jenkinson Christopher P CP   Kuulasmaa Teemu T   Kuusisto Johanna J   Manning Alisa A   Ng Maggie C Y MCY   Palmer Nicholette D ND   Balkau Beverley B   Stančáková Alena A   Abboud Hanna E HE   Boeing Heiner H   Giedraitis Vilmantas V   Prabhakaran Dorairaj D   Gottesman Omri O   Scott James J   Carey Jason J   Kwan Phoenix P   Grant George G   Smith Joshua D JD   Neale Benjamin M BM   Purcell Shaun S   Butterworth Adam S AS   Howson Joanna M M JMM   Lee Heung Man HM   Lu Yingchang Y   Kwak Soo-Heon SH   Zhao Wei W   Danesh John J   Lam Vincent K L VKL   Park Kyong Soo KS   Saleheen Danish D   So Wing Yee WY   Tam Claudia H T CHT   Afzal Uzma U   Aguilar David D   Arya Rector R   Aung Tin T   Chan Edmund E   Navarro Carmen C   Cheng Ching-Yu CY   Palli Domenico D   Correa Adolfo A   Curran Joanne E JE   Rybin Denis D   Farook Vidya S VS   Fowler Sharon P SP   Freedman Barry I BI   Griswold Michael M   Hale Daniel Esten DE   Hicks Pamela J PJ   Khor Chiea-Chuen CC   Kumar Satish S   Lehne Benjamin B   Thuillier Dorothée D   Lim Wei Yen WY   Liu Jianjun J   van der Schouw Yvonne T YT   Loh Marie M   Musani Solomon K SK   Puppala Sobha S   Scott William R WR   Yengo Loïc L   Tan Sian-Tsung ST   Taylor Herman A HA   Thameem Farook F   Wilson Gregory G   Wong Tien Yin TY   Njølstad Pål Rasmus PR   Levy Jonathan C JC   Mangino Massimo M   Bonnycastle Lori L LL   Schwarzmayr Thomas T   Fadista João J   Surdulescu Gabriela L GL   Herder Christian C   Groves Christopher J CJ   Wieland Thomas T   Bork-Jensen Jette J   Brandslund Ivan I   Christensen Cramer C   Koistinen Heikki A HA   Doney Alex S F ASF   Kinnunen Leena L   Esko Tõnu T   Farmer Andrew J AJ   Hakaste Liisa L   Hodgkiss Dylan D   Kravic Jasmina J   Lyssenko Valeriya V   Hollensted Mette M   Jørgensen Marit E ME   Jørgensen Torben T   Ladenvall Claes C   Justesen Johanne Marie JM   Käräjämäki Annemari A   Kriebel Jennifer J   Rathmann Wolfgang W   Lannfelt Lars L   Lauritzen Torsten T   Narisu Narisu N   Linneberg Allan A   Melander Olle O   Milani Lili L   Neville Matt M   Orho-Melander Marju M   Qi Lu L   Qi Qibin Q   Roden Michael M   Rolandsson Olov O   Swift Amy A   Rosengren Anders H AH   Stirrups Kathleen K   Wood Andrew R AR   Mihailov Evelin E   Blancher Christine C   Carneiro Mauricio O MO   Maguire Jared J   Poplin Ryan R   Shakir Khalid K   Fennell Timothy T   DePristo Mark M   de Angelis Martin Hrabé MH   Deloukas Panos P   Gjesing Anette P AP   Jun Goo G   Nilsson Peter P   Murphy Jacquelyn J   Onofrio Robert R   Thorand Barbara B   Hansen Torben T   Meisinger Christa C   Hu Frank B FB   Isomaa Bo B   Karpe Fredrik F   Liang Liming L   Peters Annette A   Huth Cornelia C   O'Rahilly Stephen P SP   Palmer Colin N A CNA   Pedersen Oluf O   Rauramaa Rainer R   Tuomilehto Jaakko J   Salomaa Veikko V   Watanabe Richard M RM   Syvänen Ann-Christine AC   Bergman Richard N RN   Bharadwaj Dwaipayan D   Bottinger Erwin P EP   Cho Yoon Shin YS   Chandak Giriraj R GR   Chan Juliana C N JCN   Chia Kee Seng KS   Daly Mark J MJ   Ebrahim Shah B SB   Langenberg Claudia C   Elliott Paul P   Jablonski Kathleen A KA   Lehman Donna M DM   Jia Weiping W   Ma Ronald C W RCW   Pollin Toni I TI   Sandhu Manjinder M   Tandon Nikhil N   Froguel Philippe P   Barroso Inês I   Teo Yik Ying YY   Zeggini Eleftheria E   Loos Ruth J F RJF   Small Kerrin S KS   Ried Janina S JS   DeFronzo Ralph A RA   Grallert Harald H   Glaser Benjamin B   Metspalu Andres A   Wareham Nicholas J NJ   Walker Mark M   Banks Eric E   Gieger Christian C   Ingelsson Erik E   Im Hae Kyung HK   Illig Thomas T   Franks Paul W PW   Buck Gemma G   Trakalo Joseph J   Buck David D   Prokopenko Inga I   Mägi Reedik R   Lind Lars L   Farjoun Yossi Y   Owen Katharine R KR   Gloyn Anna L AL   Strauch Konstantin K   Tuomi Tiinamaija T   Kooner Jaspal Singh JS   Lee Jong-Young JY   Park Taesung T   Donnelly Peter P   Morris Andrew D AD   Hattersley Andrew T AT   Bowden Donald W DW   Collins Francis S FS   Atzmon Gil G   Chambers John C JC   Spector Timothy D TD   Laakso Markku M   Strom Tim M TM   Bell Graeme I GI   Blangero John J   Duggirala Ravindranath R   Tai E Shyong ES   McVean Gilean G   Hanis Craig L CL   Wilson James G JG   Seielstad Mark M   Frayling Timothy M TM   Meigs James B JB   Cox Nancy J NJ   Sladek Rob R   Lander Eric S ES   Gabriel Stacey S   Burtt Noël P NP   Mohlke Karen L KL   Meitinger Thomas T   Groop Leif L   Abecasis Goncalo G   Florez Jose C JC   Scott Laura J LJ   Morris Andrew P AP   Kang Hyun Min HM   Boehnke Michael M   Altshuler David D   McCarthy Mark I MI  

Nature 20160711 7614


The genetic architecture of common traits, including the number, frequency, and effect sizes of inherited variants that contribute to individual risk, has been long debated. Genome-wide association studies have identified scores of common variants associated with type 2 diabetes, but in aggregate, these explain only a fraction of the heritability of this disease. Here, to test the hypothesis that lower-frequency variants explain much of the remainder, the GoT2D and T2D-GENES consortia performed  ...[more]

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