Genomics

Dataset Information

0

Genome-wide search for higher order epistasis as modifiers of treatment effects on bone mineral density in childhood cancer survivors


ABSTRACT: Survivors of pediatric acute lymphoblastic leukemia (ALL) exposed to curative treatments that adversely affect BMD (age- and sex-adjusted BMD Z-scores, measured via QCT). Specifically, after SNP QC and annotation, we considered 75523 autosomal SNPs mapped to putative promoter or enhancer regions to restrict our search to 3-way SNP interactions that potentially reflect gene regulation events that influence BMD. We replicated 3-SNP interactions as modifiers of treatment effects in a cohort of adult survivors of non-ALL pediatric cancers (N=1428).

PROVIDER: EGAS00001002645 | EGA |

REPOSITORIES: EGA

Similar Datasets

2022-03-09 | GSE197675 | GEO
2022-03-09 | GSE197674 | GEO
2022-03-09 | GSE197676 | GEO
2015-10-07 | GSE73822 | GEO
2023-07-31 | GSE225868 | GEO
2009-07-01 | E-GEOD-14786 | biostudies-arrayexpress
2023-09-06 | GSE216357 | GEO
2014-02-04 | E-GEOD-54514 | biostudies-arrayexpress
2023-01-31 | GSE218276 | GEO
2020-05-25 | GSE143549 | GEO