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Somatic mutation and clonal evolution in the human bladder Novaseq

ABSTRACT: In this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The data in this study will be generated by whole-genome sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer.

PROVIDER: EGAS00001003433 | EGA |

REPOSITORIES: EGA

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Somatic mutation and clonal evolution in the human bladder WES NOVASEQ

Project description:n this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The study includes targeted sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer.

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Somatic mutation and clonal evolution in the human bladder TGS

Project description:In this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The study includes targeted sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer.

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Somatic mutation and clonal evolution in the human bladder WGS

Project description:In this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The data in this study will be generated by whole-genome sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer.

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Somatic mutation and clonal evolution in the human bladder WES

Project description:In this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The data in this study will be generated by whole-exome sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer.

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EGAS00001002659-sc-2020-05-05T12:55:25Z - samples

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EGAS00001003456-sc-2020-05-05T12:56:07Z - samples

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EGAS00001003433-sc-2020-05-05T12:55:57Z - samples

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EGAS00001002842-sc-2020-05-05T12:55:37Z - samples

Project description:In this study, we aim to characterise the landscape of mutation and clonal selection in the human bladder. The data in this study will be generated by whole-exome sequencing of laser-dissected microbiopsies from the bladder. The samples utilised in this study will include urothelium from transplant donors with no history of bladder cancer and cystectomy specimens from patients with bladder cancer. . This dataset contains all the data available for this study on 2020-05-05.

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Genome-wide analysis of gene expression in cancerous and normal human bladder tissues

Project description:Analysis of differential gene expression in urothelium cancer cells compared to healthy bladder cells. The goal of researh was to discover any differences in signaling pathways regulation between cancer and normal cells and searching potential molecular markers for early cancer diagnostics. Total RNA was isolated from 9 cancerous tissue samples obtained during cystectomy and 3 normal bladder tissue samples obtaind post mortem from donors without bladder cancer.

2013-11-20 | E-GEOD-52519 | biostudies-arrayexpress

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