Genomics

Dataset Information

0

Single-cell analysis reveals fibroblast clusters linked to immunotherapy resistance in cancer


ABSTRACT: A subset of Cancer-Associated Fibroblasts (CAF-S1) mediates immunosuppression in breast cancers (BC), but its heterogeneity and its impact on immunotherapy response remain unknown. Here, we identify 8 CAF-S1 clusters by analyzing more than 18000 single CAF-S1 fibroblasts from BC. We validate the 5 most abundant clusters by flow cytometry and in silico analyses in other cancer types, highlighting their relevance. Myofibroblasts from clusters 0 and 3, characterized by extra-cellular matrix proteins and TGF signaling respectively, are indicative of primary resistance to immunotherapies. Cluster 0 up-regulates PD-1 and CTLA-4 protein levels in regulatory T lymphocytes (Tregs), which in turn increases CAF-S1 cluster 3 cellular content. Thus, our study highlights a positive feedback loop between specific CAF-S1 clusters and Tregs and uncovers their role in immunotherapy resistance.

PROVIDER: EGAS00001004030 | EGA |

REPOSITORIES: EGA

Similar Datasets

| EGAS00001004031 | EGA
2024-05-08 | PXD047038 | Pride
| EGAS00001003344 | EGA
| EGAS00001002508 | EGA
2023-12-16 | GSE221186 | GEO
2020-10-01 | GSE155699 | GEO
| EGAS00001003238 | EGA
2021-10-21 | ST001954 | MetabolomicsWorkbench
2024-01-26 | PXD039321 | Pride
2019-10-01 | GSE98827 | GEO