Genomics

Dataset Information

0

ScRNASeq of human innate lymphoid cells from different compartments


ABSTRACT: Group 1 innate lymphoid cells (ILCs) comprise a heterogeneous family of cytotoxic natural killer (NK) cells and ILC1s. We identifiy a population of “liver-type†ILC1s with transcriptional, phenotypic, and functional features distinct from those of conventional and liver-resident NK cells as well as from other previously described human ILC1 subsets. LT-ILC1s were CD49a+CD94+CD200R1+, expressed the transcription factor T-BET, do not express the activating receptor NKp80, or the transcription factor EOMES. Similar to NK cells, liver-type ILC1s produce IFN-γ, TNF-α, and GM-CSF; however, liver-type ILC1s also produce IL-2 and lack perforin and granzyme B. Liver- type ILC1s are expanded in cirrhotic liver tissues, and they can be produced from blood-derived ILC precursors in vitro in the presence of TGF-β1 and liver sinusoidal endothelial cells. Cells with similar signature and function can also be found in tonsil and intestinal tissues. Collectively, our study identifies and classifies a population of human cross-tissue ILC1s.

PROVIDER: EGAS00001006847 | EGA |

REPOSITORIES: EGA

Similar Datasets

2014-04-26 | E-GEOD-52043 | biostudies-arrayexpress
2023-07-20 | PXD038361 | Pride
2014-04-26 | E-GEOD-52045 | biostudies-arrayexpress
2008-10-22 | GSE13151 | GEO
2014-04-26 | GSE52045 | GEO
2014-04-26 | GSE52043 | GEO
2024-04-08 | GSE263459 | GEO
2021-08-25 | GSE180975 | GEO
2021-08-25 | GSE180974 | GEO
2021-08-25 | GSE180973 | GEO