Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles culicifacies samples.

ABSTRACT: Anopheles culicifacies subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

INSTRUMENT(S): Illumina HiSeq 2000

ORGANISM(S): Anopheles Culicifacies

SUBMITTER: Broad Institute

PROVIDER: PRJEB13089 | EVA | 2016-03-17

REPOSITORIES: EVA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	culicifacies_A_form.accessioned.vcf.gz	Vcf
	culicifacies_A_form.accessioned.vcf.gz.csi	Vcf
	culicifacies_A_form.accessioned.vcf.gz.tbi	Vcf
	culicifacies_A_form.vcf.gz	Vcf
	culicifacies_A_form.vcf.gz.tbi	Vcf

Items per page:

1 - 5 of 10

Similar Datasets

Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes.

Project description:Variation in vectorial capacity for human malaria among Anopheles mosquito species is determined by many factors, including behavior, immunity, and life history. To investigate the genomic basis of vectorial capacity and explore new avenues for vector control, we sequenced the genomes of 16 anopheline mosquito species from diverse locations spanning ~100 million years of evolution. Comparative analyses show faster rates of gene gain and loss, elevated gene shuffling on the X chromosome, and more intron losses, relative to Drosophila. Some determinants of vectorial capacity, such as chemosensory genes, do not show elevated turnover but instead diversify through protein-sequence changes. This dynamism of anopheline genes and genomes may contribute to their flexible capacity to take advantage of new ecological niches, including adapting to humans as primary hosts.

| S-EPMC4380271 | biostudies-literature

Expression data from Anopheles gambiae females blood fed twice within a gonotrophic cycle

Project description:Anopheline mosquitoes frequently take multiple blood meals in a single gonotrophic cycle. In this study we determined patterns of gene expression in Anopheles gambiae females blood fed twice within the first gonotrophic cycle.

2010-07-08 | GSE22806 | GEO

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles merus samples.

Project description:Anopheles merus subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13084 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles arabiensis samples.

Project description:Anopheles arabiensis subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13090 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles stephensi samples.

Project description:Anopheles stephensi subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13080 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles sinensis samples.

Project description:Anopheles sinensis subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13081 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles funestus samples.

Project description:Anopheles funestus subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13086 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles epiroticus samples.

Project description:Anopheles epiroticus subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13088 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles quadriannulatus samples.

Project description:Anopheles quadriannulatus subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13082 | EVA

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes. Anopheles farauti samples.

Project description:Anopheles farauti subset of project sequencing 16 anopheline vector genomes to complement and facilitate comparative analysis with the three other sequenced anophelines, Anopheles gambiae PEST, M and S forms.

2016-03-17 | PRJEB13087 | EVA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data