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Whole genome re-sequencing in tomato

ABSTRACT: Whole genome re-sequencing in tomato reveals variation associated with introgression and breeding events. Here we describe the whole-genome resequencing of eight tomato samples chosen to represent a large range of intra-specific variability and the identification and annotation of novel polymorphisms.Comparison of the sequences with the reference genome yielded more than 4 million single nucleotide polymorphisms (SNPs) and almost 128,000 InDels were detected.This study represents the first whole genome resequencing experiment in cultivated tomato.

INSTRUMENT(S): Illumina Genome Analyzer IIx

ORGANISM(S): Solanum Lycopersicum

SUBMITTER: Institut National de la Recherche Agronomique - France

PROVIDER: PRJEB4395 | EVA | 2014-10-20

REPOSITORIES: EVA

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			Action	DRS
	Tomato_indel_submitted_v234.corrected_merged.vcf.gz	Vcf
	Tomato_snp_submitted_v234.corrected_merged.vcf.gz	Vcf

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