Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nanopore whole genome sequence

ABSTRACT: Long read whole genome sequence of 100kGP participant

INSTRUMENT(S): Oxford Nanopore PromethION

ORGANISM(S): Homo Sapiens

SUBMITTER: Genomics England Research and Development

PROVIDER: PRJEB65017 | EVA | 2023-08-13

REPOSITORIES: EVA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	AKR1C_Inversion_VCF.vcf.csi	Other
	AKR1C_Inversion_VCF.vcf.gz	Vcf
	AKR1C_Inversion_VCF.vcf.gz.csi	Vcf

Items per page:

1 - 3 of 3

Similar Datasets

NABEC Long-Read Whole-Genome Sequencing

Project description:NABEC Long-Read Whole-Genome Sequencing

| PRJNA925283 | ENA

Whole genome sequence

Project description:Whole genome sequence Genome sequencing and assembly

| PRJNA339355 | ENA

Whole genome sequence

Project description:Whole genome sequence Genome sequencing and assembly

| PRJNA339356 | ENA

Cb175_Cayenne_FrenchGuiana whole genome sequence

Project description:Cb175_Cayenne_FrenchGuiana SOLID whole genome sequence

| PRJEB1459 | ENA

SINGLE PICOEUKARYOTES WHOLE GENOME SEQUENCE

Project description:SINGLE PICOEUKARYOTES WHOLE GENOME SEQUENCE

| PRJEB9331 | ENA

Klebsiella Pneumoniae Whole Genome Sequence

Project description:Klebsiella Pneumoniae Whole Genome Sequence

| PRJNA631564 | ENA

Third-generation long-read whole-genome sequencing of Dux knockout mouse

Project description:We applied Single Molecule Real-Time long-read whole-genome sequencing in Dux knockout mouse and confirmed the success of our Dux knockout mouse model.

2019-07-31 | GSE134830 | GEO

Genome sequence and annotation of the fungus Periconia digitata

Project description:The Periconia genus belongs to the phylum Ascomycota, order Pleosporales, family Periconiaceae. Periconia is widespread in many habitats but little is known about its ecology. Several species produce bioactive molecules, among them, Periconia digitata extracts were shown to be deadly active against the pine wilt nematode. The strain CNCM I-4278, here identified as P. digitata was able to inhibit the plant pathogen Phytophthora parasitica. Since P. digitata has great potential as biocontrol agent and the only other genome available in the Periconiaceae family is that of Periconia macrospinosa, which is quite fragmentary, we generated long-read genomic data for P. digitata. Thanks to the PacBio Hifi sequencing technology, we obtained a high-quality genome with a total length of 38,967,494 bp, represented by 13 haploid chromosomes. The transcriptomic and proteomic data strengthen and support the genome annotation. Besides representing a new reference genome within the Periconiaceae, this work will also contribute in our understanding of the Eukaryotic tree of life. Not least, opens new possibilities to the biotechnological use of the species.

2023-08-04 | PXD038175 | Pride

Genome sequence and annotation of the fungus Periconia digitata

2023-08-04 | PXD038112 | Pride

Whole Genome Sequence and RNASeq Samples for Lung Cancer

Project description:Short Read Whole Genome Sequence and RNASeq Samples for Lung Cancer

| EGAS00001007832 | EGA