Genomics

Dataset Information

0

The changed piRNA profiles of GC-1 cells exposure to 500 nM MC-LR.


ABSTRACT: We treated GC-1 cells with 500 nM or 0 nM of MC-LR for 24 h.Next, total RNA from GC-1 cells of these two groups were extracted using TRIzol Reagent. The two small RNA libraries were prepared using the Illumina small RNA preparation kit and were deep-sequenced. After adapter sequences were trimmed, 10,824,057, and 11,566,902 small RNA reads that were smaller than 45 nucleotides were obtained from control group and MC-LR group, respectively. The sequences that correspond to known piRNAs were determined by perfect sequence matching to the NCBI database (http://www.ncbi.nlm.nih.gov). We identified 244066 reads of piRNAs and 220 unique piRNA sequences in control group and 359871 reads of piRNAs and 230 unique piRNA sequences in MC-LR group

ORGANISM(S): Mus musculus

PROVIDER: GSE100987 | GEO | 2018/07/09

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2018-02-06 | GSE110150 | GEO
2016-10-13 | GSE87876 | GEO
| PRJNA393574 | ENA
2020-12-31 | GSE129849 | GEO
2021-07-30 | GSE156058 | GEO
2020-08-31 | GSE119044 | GEO
2023-01-18 | GSE163298 | GEO
2016-06-27 | E-GEOD-57681 | biostudies-arrayexpress
2014-07-26 | E-GEOD-59608 | biostudies-arrayexpress
2014-07-26 | E-GEOD-59606 | biostudies-arrayexpress