Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

ABSTRACT: Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

ORGANISM(S): Escherichia coli K-12

PROVIDER: GSE107833 | GEO | 2020/12/06

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2019-02-05 | GSE107834 | GEO

The contribution of the post-transcriptional regulator CsrA to translation

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2017-12-06 | GSE102385 | GEO

Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

Project description:Analysis of the contribution of CsrA, CsrB/C, and CsrD to gene expression in E. coli

| PRJNA421557 | ENA

The contribution of the post-transcriptional regulator CsrA to RNA stability

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability during exponential growth in Escherichia coli

2017-12-06 | GSE102381 | GEO

Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability in Salmonella during growth in LB and mLPM media

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to RNA stability in Salmonella during growth in LB and mLPM media

2019-02-05 | GSE107835 | GEO

Transcriptomic analysis of the Csr system in Erwinia amylovora

Project description:This RNA-seq analysis examined the global effect of CsrA and its non-coding small RNA (ncsRNA) csrB in E. amylovora under the T3SS-inducing condition. The csrA mutant showed differential expression of more than 20% genes in the genome, which include significant down-regulation of T3SS genes and those required for cell growth and viability. On the other hand, the csrB mutant exhibited significant up-regulation of most major virulence genes, suggesting antagonistic effect of csrB on CsrA targets.

2019-08-21 | GSE128088 | GEO

RNA binding partners of the post-transcriptional regulator CsrA

Project description:Analysis of RNA binding partners of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

2017-12-06 | GSE102380 | GEO

Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

Project description:Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli

| PRJNA421559 | ENA

Next-Generation Sequencing Facilitates Quantitative Analysis of Wild Type and csrA Mutant Helicobacter pylori J99 Transcriptomes

Project description:Purpose: The goals of this study are to clarify the CsrA-regulatory system in H. pylori by NGS-derived transcriptome profiling (RNA-seq). Method: CsrA regulatory system was determined by comparative transcriptomic analysis carried out with RNA-seq on strain J99 and csrA mutant. Results: Using an optimized data analysis workflow, fifty-three genes in the csrA mutant were found to be differentially expressed compared with the wild-type. Conclusions: Our study represents the first detailed analysis of CsrA-regulatory system in H. pylori J99.

2017-02-17 | GSE95006 | GEO

Deciphering the regulatory role of CsrA in Leptospira biflexa

Project description:Characterization of the role of CsrA in gene regulation in Leptospira biflexa

2022-04-13 | E-MTAB-10396 | biostudies-arrayexpress