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Adaptation of Root Architecture to Abiotic Stress

ABSTRACT: rs08-01_met2 - comparative analysis of catma chips with a met2 overexpression line - Role of the MET2 methyltransferase on methylation and gene expression in arabidopsis - Comparison of transcription in roots and aerial parts of one week-old plants from two lines (WT and MET2 overexpressor) Keywords: organ comparison,wt vs mutant comparison

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE11563 | GEO | 2009/05/28

SECONDARY ACCESSION(S): PRJNA106301

REPOSITORIES: GEO

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Adaptation of Root Architecture to Abiotic Stress

Project description:rs08-01_met2 - comparative analysis of catma chips with a met2 overexpression line - Role of the MET2 methyltransferase on methylation and gene expression in arabidopsis - Comparison of transcription in roots and aerial parts of one week-old plants from two lines (WT and MET2 overexpressor) Keywords: organ comparison,wt vs mutant comparison 4 dye-swap - CATMA arrays

2010-05-18 | E-GEOD-11563 | biostudies-arrayexpress

mutant comparison - characterisation of wat1 mutant

Project description:rs08-04_wat1-ralstonia - mutant comparison - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - wt versus mutant comparison in the leaf and the root Keywords: wt vs mutant comparison 6 dye-swap - CATMA arrays

2010-07-01 | E-GEOD-19077 | biostudies-arrayexpress

ralstonia infection-characterisation of wat1 mutant

Project description:rs08-04_wat1-ralstonia - ralstonia infection - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - Comparison between the mutant and the wt at different time after infection with ralstonia bacteria Keywords: treated vs untreated comparison 20 dye-swap - CATMA arrays

2010-07-31 | E-GEOD-19081 | biostudies-arrayexpress

bac2 mutant transcriptome modification during osmotic stress

Project description:rs08-05_bac2 - bac2-catma - We are studying the function of a gene encoding a mitochondrial basic amino acid carrier , BAC2 in Arabdopsis thaliana.This gene is expressed during osmotic and salt stresses, and dark-induced senescence. We wish to determine whether there are transcriptome modifications during osmotic stress in mutant plants (bac2) compared to wild-type plants . - Mutant and Wild-type plants were grown on grids for 7 days on plates containing MS/2 and saccharose. Plants were transferred for 24h to liquid medium containing MS/2 saccharose (untreated plants) or 0.4M mannitol MS/2 saccharose (treated plants). Keywords: gene knock out,treated vs untreated comparison,wt vs mutant comparison

2009-10-01 | GSE15063 | GEO

Gene expression in aerial parts of rice-Arabidopsis Os-LBD37 FOX plants

2009-12-27 | GSE14646 | GEO

Involvement of the rice LBD37 (OsLBD37) ortholog of Arabidopsis in nitrogen metabolism- and senescence-related processes

Project description:This SuperSeries is composed of the following subset Series: GSE14646: Gene expression in aerial parts of rice-Arabidopsis Os-LBD37 FOX plants GSE14647: Gene expression in leaf blades of the rice Os-LBD37 overexpressor line RK16331-13 Refer to individual Series

2009-12-26 | E-GEOD-14663 | biostudies-arrayexpress

bac2 mutant transcriptome modification during osmotic stress

2009-10-01 | E-GEOD-15063 | biostudies-arrayexpress

mutant comparison - characterisation of wat1 mutant

2010-07-01 | GSE19077 | GEO

ralstonia infection-characterisation of wat1 mutant

2010-08-01 | GSE19081 | GEO

Gene expression in aerial parts of rice-Arabidopsis Os-LBD37 FOX plants

Project description:Aerial parts of the rice-Arabidopsis FOX (Full-length cDNA overexpressor) lines K16331 and K19624 harboring the rice FL cDNA of LBD37 (Os-LBD37) were analyzed. LBD37 belongs to the plant- specific LOB- (Lateral Organ Boundary) domain family proteins first characterized in Arabidopsis. Results point towards an involvement of the rice LBD37 ortholog of Arabidopsis in nitrogen metabolism- related processes. K16331 (T2) and empty vector control plants (T2) were grown for 18 days on solid MS- medium supplemented with 20mg/l Hygromycin. For each hybridization on Affymetrix microarrays, 2 independent plants for K16331 were used. Homozygote K19624 (T3) and empty vector control plants (T3) were grown for 18 days on solid MS- medium. For each hybridization on Affymetrix microarrays, 1 plant was used.

2009-12-26 | E-GEOD-14646 | biostudies-arrayexpress

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