Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [RNA-seq]

ABSTRACT: We perfromed RNA-seq on pancreatic and intestinal tuft cells and bone marrow derived macrophages

ORGANISM(S): Mus musculus

PROVIDER: GSE116511 | GEO | 2018/07/03

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [ChIP-seq]

Project description:We perfromed POU2F3 ChIP-seq on intestinal tuft cells

2018-07-03 | GSE116510 | GEO

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis

Project description:Tuft cells play a suppressive role in pancreatic injury and tumorigenesis

| PRJNA478941 | ENA

Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling [bulk RNA-seq]

Project description:We performed bulk RNA-seq on pancreatic and intestinal tuft cells, bone marrow derived macrophages with various treatments, and mouse pancreatic stellate cells with various treatments.

2020-07-13 | GSE154258 | GEO

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [RNA-seq]

Project description:Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [RNA-seq]

| PRJNA478909 | ENA

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [ChIP-seq]

Project description:Tuft cells play a suppressive role in pancreatic injury and tumorigenesis [ChIP-seq]

| PRJNA478911 | ENA

Tuft cells play a suppressive role in pancreatic injury and tumorigenesis

Project description:This SuperSeries is composed of the SubSeries listed below.

2018-07-03 | GSE116536 | GEO

Tuft cell formation reflects epithelial plasticity in pancreatic injury; implications for modeling human pancreatitis

Project description:We performed RNA-seq on pancreatic tuft cells and non-tuft epithelial cells in caerulein-induced pancreatitis

2020-01-16 | GSE143749 | GEO

Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling [single-cell RNA-seq]

Project description:We performed Smart-seq2 scRNAseq on 156 pancreatic tuft cells . We also profiled FACS sorted EpCAM+;CD45+ immune cells and EpCAM-;CD45- non-immune stroma cells from from 3 caerulein-treated KC and 2 caerulein-treated KPouC pancreata by using the 10X Genomics 3' scRNAseq v3.1 kit.

2020-07-13 | GSE154259 | GEO

Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling

Project description:Tuft cells restrain pancreatic tumorigenesis through paracrine eicosanoid signaling

| PRJNA645675 | ENA

Lgr5+tuft marker+ intestinal tumor cells

Project description:We previously identified Dclk1, a tuft cell marker, marks tumor stem cells (TSCs) in mouse intestinal tumors. In this study, we have identified IL17RB as a cell surface marker distinctively expressed by Dclk1+ tuft-like tumor cells in mouse intestinal tumors. Using this tuft cell marker, we compared and analyzed the transcriptome of Lgr5-tuft marker-, Lgr5+tuft marker-, Lgr5-tuft marker+, and Lgr5+tuft marker+ tumor cells. These analyses revealed that tuft-like tumor cells in the intestinal tumors comprise two distinct subsets: highly differentiated tuft-like tumor cells (Lgr5-tuft marker+ cells) and tuft-like tumor cells with TCS potential (Lgr5+tuft marker+ cells).

2021-02-19 | GSE118853 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data