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Chromosomal aberration of ESCC and HSCC cell lines

ABSTRACT: In order to identify putative targets in squamous cell carcinoma (SCC), a survey of parallel chromosomal alterations and gene expression studies in 10 SCC cell lines were performed using array-CGH and microarray techniques. The most frequent changes were gains of 11q13.1-13.3 and losses of 18q12.1-23 in SCC. Furthermore, the expression levels of the sets of genes at both these loci in SCC were measured using microarray analysis. By combining the array-CGH with the microarray data, 10 genes at 11q13.1-13.3 and 6 genes at 18q12.1-23 whose expression correlated with chromosomal alterations were identified. Keywords: comparative genomic hybridization

ORGANISM(S): Homo sapiens

PROVIDER: GSE11938 | GEO | 2008/12/01

SECONDARY ACCESSION(S): PRJNA105791

REPOSITORIES: GEO

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