Transcriptomics

Dataset Information

0

Comparative gene array analyses of severe elastic fiber defects in late embryonic and newborn mouse aorta


ABSTRACT: Elastic fibers provide reversible elasticity to the large arteries and are assembled during development when hemodynamic forces are increasing. Mutations in elastic fiber genes are associated with cardiovascular disease. Mice lacking expression of the elastic fiber genes elastin (Eln-/-), fibulin-4 (Efemp2-/-), or lysyl oxidase (Lox-/-) die at birth with severe cardiovascular malformations. All three genetic knockout models have elastic fiber defects, aortic wall thickening, and arterial tortuosity. However, Eln-/- mice develop arterial stenoses, while Efemp2-/- and Lox-/- mice develop ascending aortic aneurysms. We performed comparative gene array analyses of these three genetic models for two vascular locations and developmental stages to determine differentially expressed genes and pathways that may explain the common and divergent phenotypes. We first examined arterial morphology and wall structure in newborn mice to confirm that the lack of elastin, fibulin-4, or lysyl oxidase expression provided the expected phenotypes. We then compared gene expression levels for each genetic model by three-way ANOVA for genotype, vascular location, and developmental stage. We found three genes upregulated by genotype in all three models, Col8a1, Igfbp2, and Thbs1, indicative of a common response to severe elastic fiber defects in developing mouse aorta. Genes that are differentially regulated by vascular location or developmental stage in all three models suggest mechanisms for location or stage specific disease pathology. Comparison of signaling pathways enriched in all three models shows upregulation of integrins and matrix proteins involved in early wound healing, but not of mature matrix molecules such as elastic fiber proteins or fibrillar collagens.

ORGANISM(S): Mus musculus

PROVIDER: GSE120465 | GEO | 2018/09/26

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2015-04-10 | GSE67707 | GEO
2015-04-10 | E-GEOD-67707 | biostudies-arrayexpress
2013-04-06 | E-GEOD-45821 | biostudies-arrayexpress
2013-04-06 | GSE45821 | GEO
2007-01-01 | E-MEXP-840 | biostudies-arrayexpress
2009-11-30 | E-GEOD-16012 | biostudies-arrayexpress
2018-03-31 | GSE97044 | GEO
2024-05-30 | GSE268042 | GEO
2009-11-30 | GSE16012 | GEO
2024-10-30 | GSE254500 | GEO