Transcriptomics

Dataset Information

0

Differentiation to extra-embryonic primitive endoderm from naïve human ESCs on mouse embryonic fibroblasts (MEFs) or laminin-511 (LN511) substrates


ABSTRACT: Embryonic stem cells (ESCs) can exist in at least two states that transcriptionally resemble different stages of embryonic development. Naïve ESCs resemble peri-implantation stages and primed ESCs the pre-gastrulation epiblast. In mouse, primed ESCs give rise to definitive endoderm in response to pathways downstream of Nodal and Wnt signalling. However, when these cytokines are applied to naïve ESCs, they differentiate to a cell type that approximates early primitive endoderm (PrE), the blastocyst stage progenitor layer that gives rise to the extra-embryonic endoderm. Here, we apply this context dependency to human ESCs, showing that these cytokines drive the differentiation of naïve pluripotent cells to generate extra-embryonic PrE, or hypoblast, and, as in mouse, expanded as an in vitro model for naïve extra-embryonic endoderm (nEnd) in defined conditions. Consistent with observations made in mouse, human PrE differentiation is dependent on FGF signalling in vitro, and we show, that by inhibiting FGF receptor signalling, we could simplify naïve pluripotent culture such that inhibitor requirements closer resembled those used in mouse. These nEnd cultures represent stable extra-embryonic endoderm, or human hypoblast, cell lines.

ORGANISM(S): Homo sapiens

PROVIDER: GSE138013 | GEO | 2019/11/30

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2019-11-30 | GSE138012 | GEO
2021-12-01 | GSE183270 | GEO
2023-12-05 | GSE227886 | GEO
2022-07-31 | GSE208680 | GEO
2022-07-31 | GSE205634 | GEO
2022-08-01 | GSE200534 | GEO
2015-06-13 | PXD001901 | Pride
2023-08-16 | GSE239931 | GEO
2023-08-16 | GSE240973 | GEO
2023-08-21 | GSE241348 | GEO