Transcriptomics

Dataset Information

0

Transcriptomic analysis of cyanobacterial alkane production


ABSTRACT: To identify transcriptional adaptations associated with increased alkane production in Nostoc punctiforme, we performed comparative transcriptomic analysis of an alkane overproduction strain. RNA-seq data identified a large number of highly up-regulated genes in the overproduction strain potentially involved in rRNA processing, mycosporine-glycine production, and synthesis of non-ribosomal peptides including nostopeptolide A. Other up-regulated genes encoding helical carotenoid proteins, stress-induced proteins, and those for microviridin synthesis were also up-regulated. The presence of several up-regulated genes or operons on multi-copy plasmids resulted in reduced alkane production, indicating possible targets for mutagenesis that might limit lipid droplet and alkane production.

ORGANISM(S): Nostoc punctiforme PCC 73102

PROVIDER: GSE140625 | GEO | 2019/11/19

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2013-01-01 | GSE42859 | GEO
2013-01-01 | E-GEOD-42859 | biostudies-arrayexpress
2017-01-25 | GSE94020 | GEO
2019-01-12 | GSE124969 | GEO
| PRJNA590266 | ENA
2015-09-01 | GSE61442 | GEO
| PRJNA368169 | ENA
| PRJNA368170 | ENA
| PRJNA368168 | ENA
2011-03-18 | PRD000374 | Pride