Transcriptomics

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Single-cell landscape of bronchoalveolar immune cells in COVID-19 patients


ABSTRACT: Immune characteristics associated with Coronavirus Disease-2019 (COVID-19) severity are currently unclear. We characterized bronchoalveolar lavage fluid (BALF) immune cells from patients with varying severity of COVID-19 disease and from healthy subjects using single-cell RNA-sequencing. Proinflammatory monocyte-derived macrophages were abundant in the BALF from severe COVID-9 patients. Moderate cases were characterized by the presence of highly clonally expanded tissue-resident CD8+ T cells. This atlas of the bronchoalveolar immune-microenvironment suggests potential mechanisms underlying pathogenesis and recovery in COVID-19.

ORGANISM(S): Homo sapiens

PROVIDER: GSE145926 | GEO | 2020/04/22

REPOSITORIES: GEO

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