Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Global DNA hypomethylation in ovarian cancer (450K_data)

ABSTRACT: Comparison of DNA methylome, mRNA transcriptome, and copy number variation in tumors with global loss of DNA methylation to tumors with normal global methylation.

ORGANISM(S): Homo sapiens

PROVIDER: GSE146552 | GEO | 2020/03/06

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Global DNA hypomethylation in ovarian cancer (Methylseq_data)

Project description:Comparison of DNA methylome, mRNA transcriptome, and copy number variation in tumors with global loss of DNA methylation to tumors with normal global methylation.

2020-03-06 | GSE146555 | GEO

Global DNA hypomethylation in ovarian cancer (CNV_data)

Project description:Comparison of DNA methylome, mRNA transcriptome, and copy number variation in tumors with global loss of DNA methylation to tumors with normal global methylation.

2020-03-06 | GSE146554 | GEO

Global DNA hypomethylation in ovarian cancer (Affymetrix_expression_data)

Project description:Comparison of DNA methylome, mRNA transcriptome, and copy number variation in tumors with global loss of DNA methylation to tumors with normal global methylation.

2020-03-06 | GSE146553 | GEO

Global DNA hypomethylation in ovarian cancer

Project description:Global DNA hypomethylation in ovarian cancer

| PRJNA610846 | ENA

Global DNA hypomethylation in ovarian cancer (CNV_data)

Project description:Global DNA hypomethylation in ovarian cancer (CNV_data)

| PRJNA610852 | ENA

Global DNA hypomethylation in ovarian cancer (450K_data)

Project description:Global DNA hypomethylation in ovarian cancer (450K_data)

| PRJNA610854 | ENA

Global DNA hypomethylation in ovarian cancer (Methylseq_data)

Project description:Global DNA hypomethylation in ovarian cancer (Methylseq_data)

| PRJNA610851 | ENA

Global DNA hypomethylation in ovarian cancer (Affymetrix_expression_data)

Project description:Global DNA hypomethylation in ovarian cancer (Affymetrix_expression_data)

| PRJNA610853 | ENA

Global methylome analysis and histidine methylation analysis

Project description:A methyl-specific metabolic labeling approach for global methylome mapping and found extensive His methylation at C3H1 zinc fingers.

2023-12-12 | PXD047739 |

Gene Expression Array of Human Ovarian Cancer.

Project description:The identification of genetic and epigenetic alterations from primary tumor cells has become a common method to identify genes critical to the development and progression of cancer. We provide a bioinformatic analysis of copy number variation and DNA methylation covering the genetic landscape of ovarian cancer tumor cells. We individually examined the copy number variation and DNA methylation for 44 primary ovarian cancer samples and 7 ovarian normal samples using our MOMA-ROMA technology and Affymetrix expression data as well as 379 tumor samples analyzed by The Cancer Genome Atlas. We have identified 346 genes with significant deletions or amplifications among the tumor samples. Utilizing associated gene expression data we predict 156 genes with significantly altered copy number and correlated changes in expression. We identify changes in DNA methylation and expression for all amplified and deleted genes. We predicted 615 potential oncogenes and tumor suppressors candidates by integrating these multiple genomic and epigenetic data types. Expression data accompaniment to CSHL ROMA and MOMA3 human ovarian analysis. Correlation of expression to Methylation and Copy Number Variation in ovarian cancer.

2011-10-16 | E-GEOD-27943 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data