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Evolution of Potato spindle tuber viroid quasi-species during the course of disease in tomato plants

ABSTRACT: In order to verify the production of viroid specific small RNAs (vd-sRNA) by viroids upon infecting plants, the tomato plants (Lycopersicum esculentum cv. Rutgers) were inoculated with Potato spindle tuber viroid (PSTVd) variants. After 21-days of post inoculation, total RNA was extracted and subjected for deep-sequencing using Illumina platform. Obtained data was analyzed for the presence of PSTVd specific small RNAs.

ORGANISM(S): Potato spindle tuber viroid

PROVIDER: GSE147577 | GEO | 2020/05/26

REPOSITORIES: GEO

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