Transcriptomics

Dataset Information

0

The Ets domain transcription factor Spdef drives maturation of Goblet and Paneth cells in the intestinal epithelium


ABSTRACT: BACKGROUND & AIMS: Stems cells within the intestinal epithelium generate daughter cells which undergo lineage commitment and maturation through the concerted action of the Wnt and Notch signalling cascades. Both pathways, in turn, regulate transcription factor networks which further define differentiation towards either enterocytes or one of three secretory cell lineages (Paneth, goblet or enteroendocrine cells). In this manuscript, we identified the Ets domain transcription factor, Spdef, as a novel lineage maker of goblet and Paneth cells. METHODS: To address the function of Spdef in vivo, we inactivated the Spdef gene and analysed the intestinal phenotype using a range of histological techniques and DNA microarray profiling. RESULTS: In accordance with the expression data we found that loss of Spdef severely impaired the maturation of goblet and Paneth cells and conversely lead to an accumulation of immature secretory progenitors. Moreover, we provide evidence suggesting that Spdef positively and negatively regulates a specific subset of goblet and Paneth cell genes including Cryptdins, Mmp7, Ang4, Kallikreins, and Muc2. CONCLUSION: We propose a model whereby Spdef acts downstream of Math1 to promote terminal differentiation of a secretory progenitor pool towards Paneth and goblet cells. Keywords: expression profiling

ORGANISM(S): Mus musculus

PROVIDER: GSE14892 | GEO | 2010/02/10

SECONDARY ACCESSION(S): PRJNA111963

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2013-02-08 | E-GEOD-44101 | biostudies-arrayexpress
2013-02-08 | GSE44101 | GEO
2023-10-31 | E-MTAB-12489 | biostudies-arrayexpress
2023-10-31 | E-MTAB-12626 | biostudies-arrayexpress
| PRJNA111963 | ENA
2019-01-11 | PXD005006 | Pride
2021-04-16 | GSE158186 | GEO
2022-01-08 | GSE177047 | GEO
2022-03-29 | GSE178826 | GEO
2016-06-23 | E-GEOD-76408 | biostudies-arrayexpress