Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression profiles in WT, set3Δ, and H2B 4KA

ABSTRACT: To compare gene expression profiles among WT, set3Δ, and H2B 4KA, we carried out RNA sequencing assay

ORGANISM(S): Saccharomyces cerevisiae

PROVIDER: GSE152037 | GEO | 2020/10/27

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Genome-wide mapping sites of H2B-SUMO chromatin binding in WT and set1 mutant

Project description:To map H2B-SUMO binding sites on a genome-wide scale, we carried out ChDIP experiment combined with sequencing assay

2020-10-27 | GSE152034 | GEO

Gene expression profiles in WT, set3Δ, and H2B 4KA

Project description:Gene expression profiles in WT, set3Δ, and H2B 4KA

| PRJNA638145 | ENA

Genome-wide maps of H2Bub and H2B states

Project description:We compare patterns of H2Bub and H2B across genes in WT, ubp8 KO and Dot1 OE cells

2018-07-12 | GSE109144 | GEO

Genome-wide mapping sites of Set3-TAP chromatin binding in WT and H2B 4KA mutant

Project description:To map Set3 binding sites on a genome-wide scale, we carried out ChIP experiment combined with sequencing assay

2020-10-27 | GSE152036 | GEO

H2B CUT&RUN in WT and ATF3 iKO satellite cells

Project description:H2B binding profiling analysis of ChIP-seq data for WT and ATF3-iKO satellite cells

2022-06-06 | GSE205324 | GEO

Histone H2B^3-32, H2B K->G, H2B^3-37, and H2B^30-37 mutations

Project description:Histone H2B was mutated to give H2B^3-32, H2B K->G, H2B^3-37, and H2B^30-37. Total RNA from three replicate cultures of wild-type and mutant was isolated and the expression profiles were determined using Affymetrix arrays. Comparisons between the sample groups allow the identification of genes regulated by H2B HBR domain. This SuperSeries is composed of the SubSeries listed below.

2006-04-08 | GSE3806 | GEO

Genomic expression comparison between WT and H2B(K123R)

Project description:The study aims to elucidate the effect of mono-ubiquitination of histone H2B at K123. The WT and H2B(K123R) yeast in early stationary phase were inoculated in fresh YPD rich media at OD 0.3. The cells were then grown to OD2.0 and their total RNA was isolated for genomic expression profiling with S98 arrays (Affymetrix). The experiments were performed in triplicate.

2014-03-17 | E-GEOD-17527 | biostudies-arrayexpress

Lrrc23 WT and KO whole sperm proteomic analysis

Project description:LRRC23 is required for stablizing the sperm axonemal structure. Mass spectrometry analysis was carried out to compare the proteome of Lrrc23 WT and KO sperm.

2021-11-02 | PXD025166 | Pride

Histone H2B^3-32, H2B K->G, H2B^3-37, and H2B^30-37 mutations

Project description:Histone H2B^3-32, H2B K->G, H2B^3-37, and H2B^30-37 mutations

| PRJNA94007 | ENA

Histone H2B^30-37

Project description:Histone H2B was mutated to give H2B^30-37. Total RNA from three replicate cultures of wild-type and mutant was isolated and the expression profiles were determined using Affymetrix arrays. Comparisons between the sample groups allow the identification of genes regulated by H2B HBR domain. Keywords: repeat

2006-04-08 | GSE3805 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data