Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MicroRNA expression profiles in pectoral muscle during pigeon(Columba livia) development

ABSTRACT: A comparative profile of miRNAs in pectoral muscle during pigeon development was performed by using high-throughput sequencing. We identified known pigeon miRNAs, novel miRNAs, and miRNAs that are conserved in other birds and mammals.Our results expanded the repertoire of pigeon miRNAs and may be of help in better understanding the mechanism of squab’s rapid development.

ORGANISM(S): Columba livia

PROVIDER: GSE153009 | GEO | 2020/06/23

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

MicroRNA expression profiles in livers during pigeon (Columba livia) development

Project description:A comparative profile of miRNAs in livers during pigeon development was performed by using high-throughput sequencing. We identified known pigeon miRNAs, novel miRNAs, and miRNAs that are conserved in other birds and mammals.Our results expanded the repertoire of pigeon miRNAs and may be of help in better understanding the mechanism of squab’s rapid development from the perspective of liver development.

2020-04-29 | GSE149501 | GEO

MicroRNA expression profiles in pigeon(Columba livia) skeletal muscle satellite cells during differentiation

Project description:A comparative profile of miRNAs in pre- and post-differentiated pigeon SMSCs (SMSC-1d and SMSC-5d) was performed by using high-throughput sequencing. We identified known porcine miRNAs, novel miRNAs, and miRNAs that are conserved in other birds and mammals. Our findings demonstrated that miRNAs are extensively involved in the differentiation of SMSCs in pigeons, and provide a valuable resource for the pigeon breeding.

2020-03-09 | GSE146603 | GEO

Transcriptome sequencing of the rock pigeon, Columba livia

Project description:Deep sequencing of mRNA from the rock pigeon Analysis of ploy(A)+ RNA of different specimens: heart and liver from the rock pigeon (Danish Tumbler, Oriental Frill and Racing)

2013-02-03 | E-GEOD-39333 | biostudies-arrayexpress

MicroRNA expression profiles in pectoral muscle during pigeon(Columba livia) development

Project description:MicroRNA expression profiles in pectoral muscle during pigeon(Columba livia) development

| PRJNA641159 | ENA

Transcriptome sequencing of the rock pigeon, Columba livia

Project description:Deep sequencing of mRNA from the rock pigeon

2013-02-03 | GSE39333 | GEO

Identification and expression pattern of mRNAs and lncRNAs in breast muscle during pigeon (Columba livia) development.

Project description:Hence, in order to investigate the gene expression profiles of skeletal muscle, we analyzed the four stages (1 day, 14 days, 28 days, and 2 years old) of breast muscle in White-King pigeon using transcriptome sequencing.

2023-04-01 | GSE173122 | GEO

Columba livia breed:Tarim pigeon

Project description:Columba livia breed:Tarim pigeon Genome sequencing and assembly

| PRJNA1018817 | ENA

Identification and expression pattern analysis of miRNAs in pectoral muscle during pigeon (<i>Columba livia</i>) development.

Project description:MicroRNAs (miRNAs) are a group of crucial regulators in the process of animal growth and development. However, little is known about the expression and function of miRNAs in pigeon muscles. To identify the miRNAs participating in the rapid development of pigeon pectoral muscles and quantitate their expression levels of pectoral muscles in different age stages, we performed miRNA transcriptome analysis in pigeon pectoral muscles by sequencing small RNAs over three different age stages (1-day old, 28 days old, and 2 years old). Dual-luciferase reporter assay was applied to validate the interaction between miRNA and its target gene. We identified 304 known miRNAs, 201 conserved miRNAs, and 86 novel miRNAs in pigeon pectoral muscles. 189 differentially expressed (DE) miRNAs were screened out during pigeon development. A short time-series expression miner (STEM) analysis indicated 89 DE miRNAs were significantly clustered in a progressively decreasing expression profile, and mainly enriched in biosynthesis-related GO categories and signaling pathways for MAPK and TGF-β. Dual-luciferase reporter assay indicated that a progressively down-regulated miRNA (miR-20b-5p) could directly target Krüppel-like factor 3 (KLF3) gene. To sum-up, our data expand the repertoire of pigeon miRNAs and enhance understanding of the mechanisms underlying rapid development in squabs.

| S-EPMC8234919 | biostudies-literature

Transcriptome analysis reveals the roles of long non-coding RNA and mRNA in bursa of Fabricius during pigeon (Columba livia) development

Project description:We identified 13,072 mRNAs and 19,129 lncRNAs, of which 2,977 mRNAs and 1,527 lncRNAs were differential expressed in pigeon BFs over three developmental stages.

2021-09-12 | GSE183791 | GEO

Columba livia breed:White King Pigeon

Project description:Columba livia breed:White King Pigeon Genome sequencing

| PRJNA882392 | ENA