Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of Arabidopsis thaliana seedlings exposed to different communities of commensal bacteria [SSC]

ABSTRACT: This study evaluates the transcriptome of Arabidopsis thaliana seedlings exposed to communities of suppressors (SynCom5-S1) and non-suppressors (SynCom5-NS1) of the plant immune system

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE157027 | GEO | 2021/03/27

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

RNA-seq of Arabidopsis thaliana seedlings exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]

Project description:This study evaluates the transcriptome of Arabidopsis thaliana seedlings exposed to the MAMP flg22 in the presence of 35 different bacteria

2021-03-27 | GSE156424 | GEO

RNA-seq of Arabidopsis thaliana seedlings exposed to different communities of commensal bacteria [SSC]

Project description:RNA-seq of Arabidopsis thaliana seedlings exposed to different communities of commensal bacteria [SSC]

| PRJNA659897 | ENA

RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions

Project description:This study evaluates the transcriptome of Arabidopsis thaliana seedlings growing in the presence of a diversity of synthetic bacteria communities under different phosphate availability.

2017-08-17 | GSE102248 | GEO

Parvovirus B19 NS1 protein induces cell cycle arrest at G2 phase

Project description:We construct two stable UT7/Epo-S1 cell lines which could be inducible expressing B19 NS1 and NS1 TAD2 domain mutation proteins. After treated with or without doxycycline induction, we extract the total RNA for RNA-seq analysis.

2017-03-01 | GSE83525 | GEO

RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]

Project description:This study evaluates the transcriptome of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a 35-member bacterial SynCom

2021-03-27 | GSE156425 | GEO

Urban waterways microbial communities (GeoChip)

2014-12-22 | GSE64286 | GEO

Urban waterways microbial communities (Affymetrix)

Project description:The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this proect we study the influence of land use type and environmental parameters on the structure and function of microbial communities. The present study was conducted in an urban catchment, where the metal and pollutants levels are under allowable limits. The overall goal of this study is to understand the role of engineered physicochemical environment on the structure and function of microbial communities in urban storm-water canals. Microbial community structure was determined using PhyoChio (G3)

2014-12-22 | GSE64368 | GEO

soil mcirobial functional communities

Project description:To study the soil mcirobial functional communities and the nutrient cycles couplings changes after exposure to different contaminant

2020-12-31 | GSE135153 | GEO

Urban waterways microbial communities (GeoChip)

Project description:The increased urban pressures are often associated with specialization of microbial communities. Microbial communities being a critical player in the geochemical processes, makes it important to identify key environmental parameters that influence the community structure and its function.In this proect we study the influence of land use type and environmental parameters on the structure and function of microbial communities. The present study was conducted in an urban catchment, where the metal and pollutants levels are under allowable limits. The overall goal of this study is to understand the role of engineered physicochemical environment on the structure and function of microbial communities in urban storm-water canals. Water and sediment samples were collected after a rain event from Sungei Ulu Pandan watershed of >25km2, which has two major land use types: Residential and industrial. Samples were analyzed for physicochemical variables and microbial community structure and composition. Functional gene abundance was determined using GeoChip.

2014-12-22 | E-GEOD-64286 | biostudies-arrayexpress

Urban waterways microbial communities (Affymetrix)

2014-12-22 | E-GEOD-64368 | biostudies-arrayexpress