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Genome-wide identification of transcriptional targets for ING5

ABSTRACT: In this study, we performed chromatin immunoprecipitation-coupled massive parallel DNA sequencing (ChIP-seq) to analyze the genome-wide transcriptional profile of ING5 in hepatocytes. ChIP was performed first in HepG2 cells with antibodies against ING5. Following ChIP, ING5-associated DNAs were amplified using non-biased conditions, labeled, and sequenced with HiSeq 2500. The raw sequencing image data were examined by the Illumina analysis pipeline, aligned to the unmasked human reference genome (GRCh37, hg19) using Bowtie2, and further analyzed by MACS (Model-based Analysis for ChIP-Seq).

ORGANISM(S): Homo sapiens

PROVIDER: GSE160192 | GEO | 2021/02/09

REPOSITORIES: GEO

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RNA Sequencing Analysis of JFK-overexpressing and ING5-depleted HepG2 cells

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