Genomics

Dataset Information

0

DETECTION OF FOUR NOVEL RENAL TUMORS CASES HARBORING RBM10-TFE3 FUSIONS


ABSTRACT: Microphtalmia-associated-transcriptional-factor-family translocation renal cell carcinoma (MiTF-tRCC) currently includes two main subtypes: “TFEB-tRCC” most often characterized by a t(6;11)(p21;q13) that generates a fusion of TFEB with MALAT1 and “TFE3-tRCC” characterized by rearrangements of TFE3 at Xp11.23 (2-3) that produce a variety of fusion genes. FISH is a handy method in routine practice that allows the detection of a rearrangement of TFE3. However, it reaches its limits in cases of micro-inversions or insertions: in fact paracentric microinversions that involve GRIPAP1 (Xp11.23) (23, Classe) or RBM10 (Xp11.3), very close to TFE3 , are most often undetectable.We report the clinical, immunohistological, genomic and molecular description of four novel TFE3-tRCC with RBM10-TFE3 fusion detected by targeted RNASeq analysis that illustrate the difficulties of diagnosis, especially in reason of disconcerting negative TFE3 FISH results.

ORGANISM(S): Homo sapiens

PROVIDER: GSE160731 | GEO | 2020/11/04

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2024-01-04 | GSE252047 | GEO
2024-10-01 | E-MTAB-13900 | biostudies-arrayexpress
2024-08-10 | GSE266517 | GEO
2024-07-16 | PXD040109 | Pride
2013-08-16 | E-GEOD-49901 | biostudies-arrayexpress
2024-04-01 | E-MTAB-13617 | biostudies-arrayexpress
2020-07-15 | PXD015326 | Pride
2023-03-04 | E-MTAB-12724 | biostudies-arrayexpress
2013-09-03 | GSE44976 | GEO
2013-09-03 | E-GEOD-44976 | biostudies-arrayexpress