Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ChIP-Seq, CPD-Seq and RNA-Seq in retinoblastoma 1 (RB1) knock out cells

ABSTRACT: This SuperSeries is composed of the SubSeries listed below.

ORGANISM(S): Homo sapiens

PROVIDER: GSE173128 | GEO | 2021/12/29

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

ChIP-Seq, CPD-Seq and RNA-Seq in retinoblastoma 1 (RB1) knock out cells

Project description:ChIP-Seq, CPD-Seq and RNA-Seq in retinoblastoma 1 (RB1) knock out cells

| PRJNA723856 | ENA

H3K9me3 and H3K27me3 ChIP-Seq in retinoblastoma 1 (RB1) knock out cells

Project description:Comparative analysis of H3K9me3 and H3K27me3 in RB1 KO and wild type IMR-90 cells

2021-12-29 | GSE173125 | GEO

RNA-Seq in retinoblastoma 1 (RB1) knock out IMR-90 cells

Project description:Total RNA-seq with rRNA depletion in retinoblastoma protein 1 knockout (RB1 KO) IMR-90

2021-12-29 | GSE173127 | GEO

H3K9me3 and H3K27me3 ChIP-Seq in retinoblastoma 1 (RB1) knock out cells

Project description:H3K9me3 and H3K27me3 ChIP-Seq in retinoblastoma 1 (RB1) knock out cells

| PRJNA723852 | ENA

UV-induced DNA lesion mapping in retinoblastoma 1 (RB1) knock out cells

Project description:In this study, we generated a human genome-wide map of DNA lesions induced by ultraviolet (UV) radiation in retinoblastoma knockout (RB1 KO) cells. Interestingly, we observed increased carcinogen susceptibility in closed HI-C domainS, pericentric and subtelomeric regions in RB1 KO. We also observed increased susceptibility at cancer driver loci such as TERT and TPTE. These loci are highly mutated in melanoma. Finally, we proposed that loss of tumor suppressor function can alter carcinogen susceptibility, and subsequently the mutation frequency of the genome.

2021-12-29 | GSE173126 | GEO

RNA-seq and ChIP-seq of Ssu72 Wild Type and Knock-Out MEFs, hepatocytes and ES cells

Project description:This SuperSeries is composed of the SubSeries listed below.

2020-12-28 | GSE122103 | GEO

Gene expression and UH2A ChIP-Seq binding analysis in Bmi1 knock-out and wild type MEFs

Project description:This SuperSeries is composed of the SubSeries listed below.

2009-05-20 | GSE15909 | GEO

Expression data from Amacr knock-out mouse liver and intestine

Project description:This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

2015-12-22 | E-GEOD-40125 | biostudies-arrayexpress

RNA-Seq in retinoblastoma 1 (RB1) knock out IMR-90 cells

Project description:RNA-Seq in retinoblastoma 1 (RB1) knock out IMR-90 cells