Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

WGS from transverse colon (ENCSR549QWF)

ABSTRACT: The data contained in this experiment correspond to Illumina-based whole genome shotgun sequencing of EN-TEX donor ENCDO451RUA, a 54 year old male. There are two libraries: PCR-based (9-cycle, ENCLB694UOK) and PCR-free (ENCLB257VPS), both sequenced on multiple lanes to a combined depth of ~ 60X in PE125 format. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

ORGANISM(S): Homo sapiens

PROVIDER: GSE177316 | GEO | 2021/06/15

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

WGS from transverse colon (ENCSR420NDH)

Project description:The data contained in this experiment correspond to Illumina-based whole genome shotgun sequencing of EN-TEX donor ENCDO271OUW, a 51 year old female. There are two libraries: PCR-based (9-cycle, ENCLB659IQW) and PCR-free (ENCLB898JVB), both sequenced on multiple lanes to a combined depth of ~ 60X in PE125 format. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177195 | GEO

WGS from transverse colon (ENCSR246MMZ)

Project description:The data contained in this experiment correspond to Illumina-based whole genome shotgun sequencing of EN-TEX donor ENCDO845WKR, a 37 year old male. There are two libraries: PCR-based (9-cycle, ENCLB436FSE) and PCR-free (ENCLB480CRB), both sequenced on multiple lanes to a combined depth of ~ 60X in PE125 format. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE176869 | GEO

WGS from transverse colon (ENCSR961ZRM)

Project description:The data contained in this experiment correspond to Illumina-based whole genome shotgun sequencing of EN-TEX donor ENCDO793LXB, a 53 year old female. There are two libraries: PCR-based (9-cycle, ENCLB388OQF) and PCR-free (ENCLB358DLU), both sequenced on multiple lanes to a combined depth of ~ 60X in PE125 format. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177949 | GEO

WGS from GM23248 (ENCSR674PQI)

Project description:The data contained in this experiment correspond to Illumina-based whole genome shotgun sequencing of the Personal Genomes Project 1 donor (PGP1) donor ENCDO336AAA. They were made using a PCR-based (9-cycle, ENCLB234AQO) protocol sequenced on multiple lanes to a combined depth of ~ 60X in PE125 format. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177739 | GEO

WGS from HepG2 (ENCSR350RUO)

Project description:These data correspond to shotgun PE151 Illumina sequencing done on long insert fragmented gDNA from the HepG2 cell line. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177232 | GEO

WGS from K562 (ENCSR711UNY)

Project description:These data correspond to shotgun PE151 Illumina sequencing done on short insert fragmented gDNA from the K562 cell line For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177509 | GEO

WGS from HepG2 (ENCSR276ECO)

Project description:These data correspond to shotgun PE151 Illumina sequencing done on short insert fragmented gDNA from the HepG2 cell line. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE176959 | GEO

WGS from K562 (ENCSR025GPQ)

Project description:These data correspond to shotgun PE151 Illumina sequencing done on long insert fragmented gDNA from the K562 cell line For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE176687 | GEO

WGS from transverse colon (ENCSR410ALS)

Project description:The library contained in this Experiment corresponds to 10X Genomics Chromium prepared WGS. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2021-06-15 | GSE177143 | GEO

WGS from transverse colon (ENCSR613XEH)

2021-06-15 | GSE177554 | GEO