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The virulome of Streptomyces scabiei in response to cello-oligosaccharides elicitors

ABSTRACT: We provide a manually-curated genome mining analysis of the bacterial plant pathogen Streptomyces scabiei. The expression of the deduced biosynthetic gene clusters was assessed by a RNAseq approach, and their potential to be induced by the virulence elicitors cellobiose and cellotriose was estimated by comparing mRNA levels before and after elicitor addition. Finally, we performed metabolomic analyzes to evaluate how the production of known specialized metabolites responds to virulence elicitors, in correlation (or not) with the transcriptomic data

ORGANISM(S): Streptomyces scabiei

PROVIDER: GSE181490 | GEO | 2021/08/08

REPOSITORIES: GEO

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