Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

KLF5 CUT&Tag of HBECs at ALI with and without IL-13 stimulation

ABSTRACT: Using CUT&Tag, we examined KLF5-associated genomic regions in primary human bronchial epithelial cells (HBECs) cultured at air-liquid interface (ALI) with and without IL-13 stimulation.

ORGANISM(S): Homo sapiens

PROVIDER: GSE183433 | GEO | 2022/07/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

KLF5 CUT&Tag of HBECs at ALI with and without IL-13 stimulation

Project description:KLF5 CUT&Tag of HBECs at ALI with and without IL-13 stimulation

| PRJNA760775 | ENA

ChIP-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:We used ChIP-seq to investigate epigenomic modifications in response to IFN-a, IL-17, and IL-13 in primary human bronchial epithelial cells (HBECs).

2022-05-24 | GSE185201 | GEO

Bulk RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:We used bulk cell RNA-seq to investigate transcriptional effects of IFN-a, IL-17, and IL-13 in primary human bronchial epithelial cells (HBECs).

2022-05-24 | GSE185200 | GEO

Single cell RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:We used scRNA-seq to investigate cell type-specific transcriptional effects of IFN-a, IL-17, and IL-13 in primary human bronchial epithelial cells (HBECs).

2022-05-24 | GSE185199 | GEO

ChIP-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:ChIP-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

| PRJNA768257 | ENA

Changes in microRNA and mRNA expression with differentiation of human bronchial epithelial cells [mRNA]

Project description:Normal human bronchial epithelial (NHBE) cells cultured in an air-liquid interface (ALI) system form a polarized, pseudostratified epithelium composed of basal, ciliated and goblet cells that closely resemble the in vivo airway epithelium structure. ALI cultures of NHBE cells provide a unique in vitro system to investigate airway epithelial biology, including developmental, structural and physiologic aspects. In this study, we wanted to investigate mRNA expression patterns during airway epithelium differentiation. By using microarrays, we studied the changes in expression of mRNAs in normal human bronchial epithelial cells as they differentiate from an undifferentiated monolayer to a differentiated pseudostratified epithelium after 28 days of air-liquid interface (ALI) culture, when epithelial cells differentially express basal, ciliated and goblet cell markers. Normal human bronchial epithelial cells were cultured in an air-liquid interface (ALI) system and harvested at three different time-points: subconfluent, confluent and day 28 of ALI. Samples were processed for total RNA extraction and hybridization on Affymetrix microarrays. All the experiments were performed by triplicate.

2012-10-01 | E-GEOD-39059 | biostudies-arrayexpress

RNAseq of MTEC (mouse tracheal epithelial cells) during 0, 4 and 7 days in ALI

Project description:We want to observe the dynamics of MTEC differentiation by looking at the gene expression differences at two points: ALI (Air-Liquid Interface) 4 days, and ALI 7 days.

2020-03-16 | E-MTAB-8852 | biostudies-arrayexpress

Bulk RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:Bulk RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

| PRJNA768256 | ENA

Targeted multiplexed proteomics of SARS-CoV-2 peptides in ALI cells

Project description:Human air-liquid-interface cultured cells (ALI) were infected with SARS-CoV-2 in presence or absence of the drug aprotinin. Targeted proteomics were performed on previously identified peptides modified with TMTpro.

2020-11-05 | PXD019950 | Pride

Single cell RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

Project description:Single cell RNA-seq of HBECs at ALI with and without stimulation of IFN-a, IL-17, and IL-13

| PRJNA768255 | ENA