Transcriptomics

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RNA-sequencing of tumor infiltrating cells across 12 different solid tumors type


ABSTRACT: To identify patterns of gene expression within six broadly defined cell populations, we also performed cell sorting for bulk RNA-sequencing including compartments denoted: 1. “Live”: All viable cells at the time of sorting, 2. “Tconv”: sorted conventional CD4+ and CD8+ T cells, 3. “Treg”: CD25+ CD4+ (enriched for regulatory) T cells, 4. “Myeloid”: Lymphocyte-negative HLA-DR+ (enriched for myeloid) cells, 5. “Stromal”: CD45- CD44+Thy1+ cells, and 6. “Tumor”: all other CD45- cells

ORGANISM(S): Homo sapiens

PROVIDER: GSE184398 | GEO | 2021/12/29

REPOSITORIES: GEO

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