Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Profiling of 2'-O-methylation in Leishmania donovani rRNA using RibOxi-seq

ABSTRACT: In this study we used RibOxi-seq to identify 2’-O-methylation (Nm) present on rRNAs in single nucleotide resolution.

ORGANISM(S): Leishmania donovani

PROVIDER: GSE186877 | GEO | 2024/05/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Profiling of 2'-O-methylation in Leishmania amazonensis rRNA using RibOxi-seq

Project description:In this study we report the complete repertoire of 2'-O-methylation sites present in the rRNA of Leishmania amazonensis rRNAs and a subset of small RNAs using RibOxi-seq.

2024-05-01 | GSE186879 | GEO

Mapping of 2'-O-methylation in Trypanosoma brucei small RNAs using RibOxi-seq

Project description:In this study we combined small RNA isolation from post-ribosomal supernatant with RibOxi-seq to identify 2’-O-methylation (Nm) in single nucleotide resolution. Our analysis identified ~49 Nm sites in tRNA, snRNAs, snoRNAs, 7SL RNA and vtRNA.

2024-05-01 | GSE186967 | GEO

High-throughput mapping of 2'-O-methylation in Trypanosoma brucei poly(A) RNAs using RibOxi-seq

Project description:In this study we used RibOxi-seq to identify 2’-O-methylation (Nm) present on mRNAs in single nucleotide resolution. Our analysis identified hundreds of Nm sites in mRNAs, predominantly in CDS and 3’ UTR.

2024-05-01 | GSE186923 | GEO

Profiling of 2'-O-methylation in Leishmania major rRNA using RibOxi-seq

Project description:In this study we profiled the complete repertoire of 2'-O-methylation sites present in the rRNA and a subset of small RNAs of Leishmania major rRNA using RibOxi-seq.

2024-05-01 | GSE186878 | GEO

Profiling of 2'-O-methylation in Leishmania donovani rRNA using RibOxi-seq

Project description:Profiling of 2'-O-methylation in Leishmania donovani rRNA using RibOxi-seq

| PRJNA776630 | ENA

Profiling of 2'-O-methylation in Leishmania amazonensis rRNA using RibOxi-seq

Project description:Profiling of 2'-O-methylation in Leishmania amazonensis rRNA using RibOxi-seq

| PRJNA776637 | ENA

Profiling of 2'-O-methylation in Leishmania major rRNA using RibOxi-seq

Project description:Profiling of 2'-O-methylation in Leishmania major rRNA using RibOxi-seq

| PRJNA776629 | ENA

rRNA 5-methylcytosine in Arabidopsis thaliana

Project description:Here we use bisulfite conversion of RNA combined with high-throughput IIlumina sequencing (RBS-seq) to identify single-nucleotide resolution of m5C sites in ribosomal RNAs of all three sub-cellular transcriptomes in Arabidopsis thaliana. m5C sites in rRNAs were also anlyzed in Arabidopsis T-DNA knockouts for the RNA methyltransferases TRM4A, TRM4B, TRDMT1, NSUN5, NOP2A, NOP2B and NOP2C.

2015-10-01 | GSE68444 | GEO

Profiling of T. brucei rRNA Nm landscape using RibOxi-seq

Project description:We performed RiOxi-seq on both procyclic form and bloodstream form of T. brucei in order to contribute to the extensive characterization of 2'-OMe sites by Dr.Michaeli's lab and collaborators.

2018-12-31 | GSE102516 | GEO

Leishmania donovani

Project description:Genetic basis of Sri Lankan L. donovani clinical isolates from patients with different disease phenotypes

| PRJNA413320 | ENA