Transcriptomics

Dataset Information

0

DREAM Interrupted: Severing LIN-35-MuvB association in Caenorhabditis elegans impairs DREAM function but not its chromatin localization


ABSTRACT: The highly conserved DREAM transcriptional repressor complex contains an RB-like pocket protein, an E2F-DP transcription factor heterodimer, and the 5-subunit MuvB complex. Using CRISPR/Cas9 targeted mutagenesis, we disrupted the interaction between the sole Caenorhabditis elegans pocket protein LIN-35 and the MuvB subunit LIN-52. A triple alanine substitution of LIN-52's LxCxE motif (3A) severed LIN-35-MuvB association and caused classical DREAM mutant phenotypes, including synthetic multiple vulvae, high-temperature arrest, and ectopic expression of germline genes in the soma. We performed RNA-seq in lin-52(3A) mutant late embryos (4 replicates) compared to lin-52(WT) wild-type late embryos (4 replicates) to assess the genome-wide effects on gene expression that result from severing LIN-35-MuvB association.

ORGANISM(S): Caenorhabditis elegans

PROVIDER: GSE199287 | GEO | 2022/05/24

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2017-10-25 | GSE95071 | GEO
| PRJNA819162 | ENA
2020-08-13 | GSE155190 | GEO
2020-08-13 | GSE155189 | GEO
| PRJNA102609 | ENA
2007-07-21 | GSE8537 | GEO
2008-06-16 | E-GEOD-8537 | biostudies-arrayexpress
2015-04-02 | GSE62833 | GEO
2015-04-02 | E-GEOD-62833 | biostudies-arrayexpress
2007-11-14 | GSE9087 | GEO