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Gene expression analysis of HepaRG cells that ectopically express miR-371-3 cluster

ABSTRACT: the immoratlized hepatic cell line HepaRG was transduced with a retroviral vector containing the miR-371-3 cluster. As a control, transduction was performed with the empty vector. Transcriptome analysis was performed by using the Affymetrix whole-transcript human gene 1.0 ST array. Each condition was analyzed in triplicate

ORGANISM(S): Homo sapiens

PROVIDER: GSE21080 | GEO | 2012/12/31

SECONDARY ACCESSION(S): PRJNA129679

REPOSITORIES: GEO

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Gene expression analysis of HepaRG cells that ectopically express miR-371-3 cluster

Project description:the immoratlized hepatic cell line HepaRG was transduced with a retroviral vector containing the miR-371-3 cluster. As a control, transduction was performed with the empty vector. Transcriptome analysis was performed by using the Affymetrix whole-transcript human gene 1.0 ST array. Each condition was analyzed in triplicate hierarchical unsupervised clustering of HB samples according to their miRNA expression profile identifies 2 tumor subgroups associated with different degree of differentiation, proliferation rate and invasive phenotype. As subset of these tumors is used as training set to build a mir classifier. When the signature is applied to an independent test set, an independent series of HB is classified patients into two groups associated with the clinical features identified in the first set of patients.

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Analysis of Hepatoblastoma and normal fetal liver miRNA profiles and HepaRG cells that ectopically express miR-371-3 cluster

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Identification of differentially expressed genes between control and miR-371~373 cluster-overexpressing colorectal cancer cells

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The Co-regulated Genes by Ectopic Expression of MiR-371-372-373 Cluster in HepG2 Cells

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