Transcriptomics

Dataset Information

0

Organotypic Human Lung Bud Microarrays Identify BMP-dependent SARS-CoV-2 Infection in Lung Cells


ABSTRACT: Although lung disease is the primary clinical outcome in COVID-19 patients, how SARS-CoV-2 induces lung pathology remains elusive. Here we describe a high-throughput platform to generate self-organizing ad commensurate human lung buds derived from hESCs cultured on micropatterned substrates. Lung buds resemble human fetal lungs and display proximo-distal patterning of alveolar and airway tissue directed by KGF. These lung buds are susceptible to infection by SARS-CoV-2 and endemic coronaviruses and can be used to track cell type-specific cytopathic effects in hundreds of lung buds in parallel. Transcriptomic comparisons of infected lung buds and postmortem tissue of COVID-19 patients identified an induction of BMP signaling pathway. BMP activity renders lung cells more susceptible to SARS-CoV-2 infection and its pharmacological inhibition impairs infection by this virus. These data highlight the rapid and scalable access to disease-relevant tissue using lung buds that recapitulate key features of human lung morphogenesis and viral infection biology.

ORGANISM(S): Homo sapiens

PROVIDER: GSE225564 | GEO | 2023/02/21

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2021-12-21 | GSE163698 | GEO
2023-05-01 | GSE206677 | GEO
2024-08-21 | GSE275240 | GEO
2023-01-31 | GSE208076 | GEO
2022-08-31 | GSE183850 | GEO
2022-01-21 | E-MTAB-11162 | biostudies-arrayexpress
2022-02-05 | E-MTAB-10740 | biostudies-arrayexpress
2022-01-23 | GSE149687 | GEO
2020-11-06 | GSE160435 | GEO
2020-11-06 | GSE155518 | GEO