Transcriptomics

Dataset Information

0

Paxbp1 is indispensable for the survival of CD4 and CD8 double-positive thymocytes


ABSTRACT: The lifespan of double-positive (DP) thymocytes is critical for intrathymic development and shaping the peripheral T cell repertoire. However, the molecular mechanisms that control DP thymocyte survival remain poorly understood. Paxbp1 is a conserved nuclear protein that has been reported to play important roles in cell growth and development. Its high expression in T cells suggests a possible role in T cell development. Here, we observed that deletion of Paxbp1 resulted in thymic atrophy in mice lacking Paxbp1 in the early stages of T cell development. Conditional loss of Paxbp1 resulted in fewer CD4+CD8+ DP T cells, CD4 and CD8 single positive (SP) T cells in the thymus, and fewer T cells in the periphery. Meanwhile, Paxbp1 deficiency had limited effects on the CD4-CD8- double negative (DN) or immature single-positive (ISP) cell populations. Instead, we observed a significant increase in the susceptibility of Paxbp1-deficient DP thymocytes to apoptosis. Consistent with this, RNA-Seq analysis revealed a significant enrichment of the apoptotic pathway within differentially expressed genes in Paxbp1-deficient DP cells compared to control DP cells. Together, our results suggest a new function for Paxbp1, which is an important mediator of DP thymocyte survival and critical for proper thymic development.

ORGANISM(S): Mus musculus

PROVIDER: GSE233211 | GEO | 2023/06/14

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2004-07-01 | GSE1460 | GEO
2011-08-10 | GSE31082 | GEO
2011-08-09 | E-GEOD-31082 | biostudies-arrayexpress
2007-08-06 | E-GEOD-1460 | biostudies-arrayexpress
2024-08-18 | GSE271324 | GEO
2015-09-11 | E-GEOD-72917 | biostudies-arrayexpress
2019-04-01 | E-MTAB-7758 | biostudies-arrayexpress
2020-12-17 | GSE156070 | GEO
2022-09-18 | GSE213606 | GEO
2008-11-13 | E-GEOD-9700 | biostudies-arrayexpress