Transcriptomics

Dataset Information

0

Intercellular communication atlas reveals Oprm1 as a neuroprotective factor for retinal ganglion cells


ABSTRACT: The neuronal cell death results in neurodegenerative diseases. The extracellular environment plays a critical role in regulating cell viability. In this study, we explore how intercellular communication contributes to the survival of retinal ganglion cells (RGCs) following the optic nerve crush (ONC). By performing single-cell RNA-seq on whole retinal cells, we observed transcriptomic responses in non-RGC retinal cells to the injury, with astrocytes and Müller glia having the most interactions with RGCs. By comparing the RGC subclasses showing distinct resilience cell death, we identified top 47 interactions that are stronger in the high-survival RGCs, likely representing neuroprotective interactions. We performed functional assays on one of the receptors, Mu-opioid receptor (Oprm1). Although Oprm1 is preferentially expressed in intrinsically photosensitive retinal ganglion cells (ipRGCs), its neuroprotective effect could be transferred to multiple RGC subclasses by specific overexpressing Oprm1 in pan-RGCs. Our study provides an atlas of cell-cell interactions in both intact and post-ONC retina and an effective strategy to predict molecular mechanisms in neuroprotection, underlying the principal role played by extracellular environment in supporting neuron survival.

ORGANISM(S): Mus musculus

PROVIDER: GSE241268 | GEO | 2023/10/01

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2023-12-26 | GSE248537 | GEO
2024-08-28 | GSE260952 | GEO
2023-07-01 | GSE213937 | GEO
2019-11-27 | GSE137398 | GEO
2019-11-27 | GSE137863 | GEO
2019-11-27 | GSE137828 | GEO
2019-11-27 | GSE133382 | GEO
2024-01-26 | GSE252516 | GEO
2024-01-26 | GSE252514 | GEO
2022-06-28 | GSE202154 | GEO