Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptomic profile at single cell level of OCT2fl/fl and Ncr(+)/OCT2fl/fl mice [scRNA-seq]

ABSTRACT: We used single cell RNA sequencing (scRNA-seq) to investigate the role of OCT2 in the regulation of Regnase-1.

ORGANISM(S): Mus musculus

PROVIDER: GSE245678 | GEO | 2024/05/30

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptomic profile at single cell level of splenic NK cells from Reg-1fl/fl and Reg-1ΔNK mice [CITE-Seq]

Project description:Regnase-1 functions as an endoribonuclease protein. We used single cell RNA sequencing (scRNA-seq) to identify candidate genes that are regulated by Regnase-1-mediated mRNA decay

2024-05-30 | GSE237639 | GEO

Transcriptomic profile at single cell level of OCT2fl/fl and Ncr(+)/OCT2fl/fl mice [scRNA-seq]

Project description:Transcriptomic profile at single cell level of OCT2fl/fl and Ncr(+)/OCT2fl/fl mice [scRNA-seq]

| PRJNA1029543 | ENA

Identification of the genome-wide binding sites of OCT2 in Reg-1fl/fl- and Reg-1ΔNK-NK cells. [ChIP-Seq]

Project description:The expression of OCT2 was also increased in NK cells from Reg-1fl/fl in response to IL-12/18 stimulation implying that OCT2 has an intrinsic function not only in Regnase-1-deleted NK cells but also in wild-type NK cells. To identify the genome-wide binding sites of OCT2, we performed chromatin immunoprecipitation sequencing (ChIP-seq) for OCT2 in Reg-1fl/fl- and Reg-1ΔNK-NK cells.

2024-05-30 | GSE237640 | GEO

Gene expression profile for sort purified CD11c+ cells derived from C57BL/6 or Klf4fl/fl ItgaxCre+ spleens, sLNs and mLNs at single cell level [scRNA-Seq]

Project description:We used single cell RNA sequencing (scRNA-seq) to analyze the diversity of CD11c+ cells in spleen, skin draining lymph nodes and mesenteric lymphnodes. We have compared the cells derived from C57BL/6 or Klf4fl/fl ItgaxCre+ mice.

2023-02-24 | GSE223841 | GEO

Transcriptomic profile at single cell level of TIL-NK cells and tumor cells from tumor-bearing Reg-1fl/fl and Reg-1ΔNK mice

Project description:The innate immune system can recognize tumor cells and coordinate with the adaptive immune system to initiate an anti-tumor response within the tumor microenvironment. To investigate the role of NK cells and their interaction with other immune cells in the anti-tumor immunity in Reg-1ΔNK. We subcutaneously injected B16F10 cells into Reg-1fl/fl and Reg-1ΔNK, followed by scRNA-seq analysis of the whole tumor cell suspension and sorted TIL-NK cells.

2024-05-30 | GSE237642 | GEO

Gene expression profile at single cell level of aortic endothelial cells (ECs) from endothelial-specific Epas1 knockout mice (Epas1fl/fl, Cdh5Cre/+) and controls (Epas1fl/fl, Cdh5+/+)

Project description:Single cell RNA sequencing (scRNA-seq) was used to analyse the diversity of ECs in the mouse aorta, as well as the effect of endothelial-specific Epas1 deletion on aortic endothelial cells.

2024-08-27 | GSE274418 | GEO

Gene expression profile at single cell level of CD11b+/CD45+ myeloid cells from the brain (scRNA-seq_female)

Project description:We used single cell RNA sequencing (scRNA-seq) to analyze the subsets of myeloid cells affected by deletion of miR-155 in microglia.

2023-04-10 | GSE205483 | GEO

Streptococcus pneumoniae membrane proteomics of WT and scRNA mutants

Project description:We studied the membrane protein compositions of Streptococcus pneumoniae WT and scRNA mutant strains, with or without the CSP1 induction into competence state.

2024-08-19 | PXD054463 | Pride

Epigenetic profile of iPSC differentiation process by scRNA-seq

Project description:Induced pluripotent stem cells (iPSC) derived from fibroblasts of two healthy individuals were differentiated into NPC. Cells were profiled by scRNA-seq.

2021-08-17 | E-MTAB-10220 | biostudies-arrayexpress

Comparative gene expression profile of canine and human invariant Natural Killer T (iNKT) cells at single cell level [scRNA-seq]

Project description:We used single cell RNA sequencing (scRNA-seq) to characterize the heterogeneity of peripheral blood-derived canine iNKT cells relative to that of human iNKTs.

2023-09-05 | GSE229457 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data