Transcriptomics

Dataset Information

0

Loss of synovial tissue macrophage homeostasis precedes Rheumatoid Arthritis clinical onset.


ABSTRACT: This study performed an in-depth investigation into the myeloid cellular landscape in the synovium of Rheumatoid Arthritis (RA) patients, ‘individuals-at-risk’ of RA and healthy controls (HC). Flow-cytometric analysis demonstrated for the first time, the presence of a CD40-expressing CD206+CD163+ macrophage population dominating the inflamed RA synovium, associated with disease-activity and treatment response. RNAseq/metabolic analysis demonstrated that this macrophage population is transcriptionally distinct, displaying unique inflammatory, and tissue-resident gene signatures, has a stable bioenergetic profile, and regulates stromal cell responses. scRNAseq profiling of 67908 RA and HC synovial-tissue cells identified nine transcriptionally distinct macrophage-clusters. IL- 1B+CCL20+ and SPP1+MT2A+ are the principal macrophage clusters in RA synovium, displaying heightened CD40 gene expression, capable of shaping stromal cell responses, and importantly are enriched pre-disease onset. Combined these findings identify the presence of an early pathogenic myeloid signature that shapes the RA joint microenvironment and represents a unique opportunity for early diagnosis and therapeutic intervention.

ORGANISM(S): Homo sapiens

PROVIDER: GSE246416 | GEO | 2024/09/25

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2016-01-27 | GSE77298 | GEO
2024-09-10 | GSE246421 | GEO
2010-06-25 | E-GEOD-13026 | biostudies-arrayexpress
2008-10-03 | GSE13026 | GEO
2023-05-18 | GSE216245 | GEO
| PRJNA803484 | ENA
2020-04-09 | E-MTAB-6141 | biostudies-arrayexpress
2020-11-01 | GSE122616 | GEO
2023-03-31 | GSE213842 | GEO
2020-04-18 | E-MTAB-8322 | biostudies-arrayexpress