Transcriptomics

Dataset Information

0

Comparative transcriptome analysis between hybrid and inbred lines provides molecular insights into vein ratio of leaf in Nicotiana tabacum L.


ABSTRACT: Heterosis has greatly improved the yield and quality of crops. However, previous studies often focused on improving the yield and quality of the shoot system, while research on the root system was neglected. We determined the root numbers of 12 F1 hybrids, all of which showed strong heterosis, indicating that tobacco F1 hybrids have general heterosis. To understand its molecular mechanism, we selected two hybrids with strong heterosis, GJ (G70 × Jiucaiping No.2) and KJ (K326 × Jiucaiping No.2), and their parents for transcriptome analysis. There were 84.22% and 90.25% of the differentially expressed genes were overdominantly expressed. The enrichment analysis of these overdominantly expressed genes showed that "Plant hormone signal transduction", "Phenylpropanoid biosynthesis", "MAPK signaling pathway - plant", and "Starch and sucrose metabolism" pathways were associated with root development. We focused on the analysis of the biosynthetic pathways of auxin(AUX), cytokinins(CTK), abscisic acid(ABA), ethylene(ET), and salicylic acid(SA), suggesting that overdominant expression of these hormone signaling pathway genes may enhance root development in hybrids.

ORGANISM(S): Nicotiana tabacum

PROVIDER: GSE246929 | GEO | 2024/09/11

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2023-01-22 | GSE218712 | GEO
2022-06-30 | GSE198555 | GEO
2024-01-01 | GSE252097 | GEO
2019-11-07 | GSE131682 | GEO
2013-08-19 | GSE41797 | GEO
2013-08-19 | E-GEOD-41797 | biostudies-arrayexpress
2016-11-07 | GSE74551 | GEO
2024-10-21 | GSE186372 | GEO
2015-05-31 | E-GEOD-51578 | biostudies-arrayexpress
2012-06-27 | E-MTAB-4345 | biostudies-arrayexpress