Transcriptomics

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Escherichia coli biofilm: mono-species culture vs. mixed-species culture


ABSTRACT: Transcription profile of Escherichia coli cells in mono-species pure biofilms was compared to that of E. coli cells in E. coli-Stenotrophomonas maltophilia dual-species biofilms. E. coli cells were separated from dual-species biofilms before total RNA extraction to eliminate possible cross hybridization from S. maltophilia transcripts. The separation method was developed by combining the use of reagent RNAlater and immuno-magnetic separation. Pure E. coli biofilms were processed with the same separation protocol before RNA extraction.

ORGANISM(S): Escherichia coli K-12 Escherichia coli

PROVIDER: GSE24912 | GEO | 2013/12/30

SECONDARY ACCESSION(S): PRJNA133403

REPOSITORIES: GEO

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