Escherichia coli biofilm: mono-species culture vs. mixed-species culture
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ABSTRACT: Transcription profile of Escherichia coli cells in mono-species pure biofilms was compared to that of E. coli cells in E. coli-Stenotrophomonas maltophilia dual-species biofilms. E. coli cells were separated from dual-species biofilms before total RNA extraction to eliminate possible cross hybridization from S. maltophilia transcripts. The separation method was developed by combining the use of reagent RNAlater and immuno-magnetic separation. Pure E. coli biofilms were processed with the same separation protocol before RNA extraction.
ORGANISM(S): Escherichia coli K-12 Escherichia coli
PROVIDER: GSE24912 | GEO | 2013/12/30
SECONDARY ACCESSION(S): PRJNA133403
REPOSITORIES: GEO
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