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[E-MTAB-75] Cryptic unstable transcripts in yeast

ABSTRACT: Poly(A) and CUT RNA fractions are compared using 3 'Long-SAGE deep-sequencing. ArrayExpress Release Date: 2008-12-19 Publication Title: Widespread bidirectional promoters are the major source of cryptic transcripts in yeast Publication Author List: Helen Neil, Christophe Malabat, Yves d'Aubenton-Carafa, Zhenyu Xu, Lars M. Steinmetz and Alain Jacquier Person Roles: submitter Person Last Name: Malabat Person First Name: Christophe Person Mid Initials: Person Email: christophe.malabat@pasteur.fr Person Phone: Person Address: Unité de Génétique des Interactions Macromoléculaires; CNRS, URA2171,F-75015, Paris, France Person Affiliation: Institut Pasteur

ORGANISM(S): Saccharomyces cerevisiae

PROVIDER: GSE25132 | GEO | 2011/02/05

SECONDARY ACCESSION(S): PRJNA134585

REPOSITORIES: GEO

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[E-MTAB-131] Estrogen Receptor alpha estrogen-responsive binding sites in MCF-7

Project description:We performed chromatin immunoprecipitation (ChIP) with two polyclonal anti-ERalpha antibodies directed against the N- and C-terminus of the protein, with or without estrogen treatment for 45 minutes of MCF-7 cells, and the immunoprecipitated DNA was sequenced with the Illumina/Solexa Genome Analyzer. ArrayExpress Release Date: 2009-07-27 Publication Title: Estrogen receptor alpha controls a gene network in luminal-like breast cancer cells comprising multiple transcription factors and microRNAs. Publication Author List: Cicatiello L, Mutarelli M, Grober OM, Paris O, Ferraro L, Ravo M, Tarallo R, Luo S, Schroth GP, Seifert M, Zinser C, Chiusano ML, Traini A, De Bortoli M, Weisz A. Person Roles: submitter Person Last Name: Mutarelli Person First Name: Margherita Person Mid Initials: Person Email: mutarelli@tigem.it Person Phone: Person Address: Person Affiliation: Person Roles: investigator Person Last Name: Weisz Person First Name: Alessandro Person Mid Initials: Person Email: alessandro.weisz@unina2.it Person Phone: Person Address: Person Affiliation:

2011-02-05 | GSE25684 | GEO

[E-MTAB-345] ChIP-Seq of human MCF-7 cells with anti-ERalpha following estrogen treatment

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2011-02-05 | GSE25769 | GEO

[E-MTAB-636] Plasmodium yoelii RNA-Seq

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2011-07-14 | GSE30620 | GEO

Identification of SUMO sites by LC-MSMS

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[E-MTAB-445] Transcription profiling by high throughput sequencing of blackface sheep infected with the gastrointestinal helminth Teladorsagia circumcincta to analyse resistance to infection

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2011-07-14 | GSE30606 | GEO

[E-MTAB-214] ChiP-seq profiling of Drosophila melanogaster salivary glands to identify targets for NSL1 and MCRS2.

Project description:ChiP-seq profiling of Drosophila melanogaster salivary glands to identify targets for NSL1 and MCRS2. ArrayExpress Release Date: 2010-04-16 Publication Title: The Nonspecific Lethal Complex Is a Transcriptional Regulator in Drosophila Publication Author List: Raja SJ, Charapitsa I, Conrad T, Vaquerizas JM, Gebhardt P, Holz H, Kadlec J, Fraterman S, Luscombe NM, Akhtar A. Person Roles: submitter Person Last Name: Vaquerizas Person First Name: Juan Person Mid Initials: M Person Email: jvaquerizas@ebi.ac.uk Person Phone: Person Address: Person Affiliation: EBI

2010-12-04 | GSE25709 | GEO

[E-MTAB-607] Transcription profiling by high throughput sequencing of the planarian Schmidtea mediterranea during head regeneration

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[E-MTAB-533] GENCODE Targeted Sequencing Batch III

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2011-07-14 | GSE30612 | GEO

[E-MTAB-610] Tag profiling of genes from two Pachycladon species

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2011-07-14 | GSE30618 | GEO

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2010-12-04 | GSE25030 | GEO

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