Genomics

Dataset Information

0

Assessing chromatin accessibility in maize using ATAC-seq


ABSTRACT: The depiction of maize chromatin architecture using Assay for Transposase Accessible Chromatin with high-throughput sequencing (ATAC-seq) provides great opportunities to investigate cis-regulatory elements, which is crucial for crop improvement. We demonstrate a streamlined ATAC-seq protocol for maize in which nuclei purification can be achieved without cell sorting, and using only a standard bench-top centrifuge. Our protocol, coupled with the bioinformatic analysis, provides a precise and efficient assessment of the maize chromatin landscape.

ORGANISM(S): Zea mays

PROVIDER: GSE252638 | GEO | 2024/01/10

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2019-01-23 | GSE120491 | GEO
2020-07-15 | GSE145187 | GEO
| PRJNA493188 | ENA
| PRJNA1061549 | ENA
| PRJNA522731 | ENA
| PRJNA309081 | ENA
2018-05-30 | GSE110987 | GEO
2016-01-20 | E-GEOD-76930 | biostudies-arrayexpress
| phs001438 | dbGaP
2016-01-20 | GSE76930 | GEO