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Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy

ABSTRACT: The human kidneys are comprised of multiple different cell types in a complex anatomical arragemnt that is optimal for their key functions such as waste removal, regulation of fluid and electrolyte homeostasis and production of hormones. In chronic kidney disease (CKD) this arrangement is disrupted with de-differentiation and atrophy of epithelial cells, recruitment of immune cells and activation of myofibroblasts to produce excess scarring. A better understanding of cellular phenotypes, complex intercellular communication and intracellular signaling pathways that promote CKD could lead to development of novel therapies. We applied single-cell spatial transcriptomics (CosMx Spatial molecular imaging) to human kidney biopy and nephrectomy samples from patients with IgA nephropathy (n=6), minimal change disease (n=3) and advanced pyelonephritis (n=4).

ORGANISM(S): Mus musculus Homo sapiens

PROVIDER: GSE253439 | GEO | 2025/03/25

REPOSITORIES: GEO

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Nanostring CosMx 6,000-plex RNA profiling of human kidney nephrectomy specimens

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Nanostring CosMx 980-plex RNA profiling of human kidney biopsy and nephrectomy

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