Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Spotted Dick Chromatin Immunopurification

ABSTRACT: Chromatin enriched by immunopurification with antibodies against the Drosophila transcription factor spotted dick compared with pre immune sera on a cDNA microarray Keywords: parallel sample

ORGANISM(S): Drosophila melanogaster

PROVIDER: GSE2632 | GEO | 2005/05/07

SECONDARY ACCESSION(S): PRJNA92271

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Spotted Dick Chromatin Immunopurification

Project description:Chromatin enriched by immunopurification with antibodies against the Drosophila transcription factor spotted dick compared with pre immune sera on a cDNA microarray

2010-06-10 | E-GEOD-2632 | biostudies-arrayexpress

Drosophila HSF chromatin IP -cDNA array

Project description:Chromatin immunopurifications from heat shocked drosophila embryos with anti-Heat shock factor sera compared with immunopurification with pre-immune sera. Hybridisations to cDNA arrays. Keywords: repeat sample

2005-05-30 | GSE2398 | GEO

Drosophila HSF chromatin IP -cDNA array

2010-06-10 | E-GEOD-2398 | biostudies-arrayexpress

Spotted long oligonucleotide arrays

Project description:Both spotted long oligonucleotide arrays and Affymetrix GeneChips were used to measure differential gene expression in two RNA samples (K562 erythroleukemia RNA and the Stratagene Universal Human Reference RNA). For Affymetrix technology, the two RNAs were analyzed separately. There are two replicates for K562 RNA (GSM4843 and GSM4844) and three for the Stratagene Universal reference (GSM4845-GSM4847). Two types of spotted long oligonucleotide arrays were used. These arrays were used to do two-color hybridizations to directly compare K562 and Universal reference RNAs. One array (GPL273) was made with probes from the Operon Human Genome Oligo Set Version 1. These arrays were used with unamplified cDNA probes (6 replicates, GSM4848-GSM4853), with aRNA probes produced by one round of T7 RNA polymerase-based amplification (6 replicates, GSM4854-GSM4859), and with aRNA probes produced by two rounds of amplification (2 replicates, GSM4860-GSM4861). Keywords: parallel sample

2003-03-18 | GSE344 | GEO

GFP or spotted-dick RNAi treated S2 cells

Project description:Drosophila S2 cells treated with either GFP or spottes-dick dsRNA and incubated for 5 days. There are three replicates for each condition. Keywords = Spotted-dick Keywords: other

2005-05-06 | GSE2623 | GEO

Tiling Array HSF immunopurification

Project description:Mapping of in vivo Heat Shock Factor binding sites in drosophila embryos with genomic tiling arrays Keywords: repeat sample

2005-05-30 | GSE2423 | GEO

Drosophila melanogaster

Project description:Spotted Dick Chromatin Immunopurification

| PRJNA92271 | ENA

RNAi knock down of spotted-dick in Drosophila S2 cells

Project description:Drosophila S2 cells treated with either GFP or spotted-dick dsRNA and incubated for 5 days. There are three replicates for each condition.

2007-07-06 | E-GEOD-2623 | biostudies-arrayexpress

mCGH of cervical cancer

Project description:Genomic alteration of cervical cancer samples. Analysis by CGH array. Array spotted at AECOM (NY) with human ESTs. Analysis as in Bourdon et al. Cancer Res. 2002 Nov 1;62(21):6218-23 Keywords: parallel sample

2005-04-13 | GSE1715 | GEO

Trf4p in vivo crosslinking and ribonucleoprotein-immunopurification-chip analysis (X-RIP-Chip)

Project description:In vivo cross-linking and ribonucleoprotein-immunopurification experiments followed by microarray analysis of bound RNAs (X-RIP-chip). Cells expressing recombinant tandem-affinity purification (TAP)-tagged Trf4 protein were cross-linked with formaldehyde, and Trf4-containing ribonucleoprotein complexes were recovered by affinity selection on IgG-coupled beads (see linked protocol). As a control for non-specifically enriched RNAs, the same experiment was done with untagged WT cells and with cells expressing Fpr1-TAP, a peptidyl-prolyl-cis-trans-isomerase not expected to bind RNA. Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Antigenic peptide used in IP: Protein A derivative

2009-07-15 | GSE16105 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data