Transcriptomics

Dataset Information

0

Recessive resistance to Watermelon mosaic virus in melon is associated with a defense response as revealed by microarray analysis


ABSTRACT: Virus resistances that are recessively inherited are associated with loss-of-susceptibility resistance alleles. Resistance to Watermelon mosaic virus (WMV) of melon accession TGR-1551 is expressed as a drastic reduction of the virus titer, and is recessively inherited. In this work, viral RNA accumulation was measured in TGR-1551 and in susceptible WMV-infected melon plants by real time quantitative PCR (qPCR), and gene expression of 17,443 unigenes represented in a melon microarray was monitored in a time-course experiment. Virus accumulation was higher in inoculated cotyledons of the resistant genotype up to 7 days post-inoculation; from this time on, virus accumulation was much higher in plants of the susceptible genotype. Microarray experiments were carried with samples from inoculated cotyledons at 1 and 3 dpi to monitor early changes in response to virus infection, and at 7 dpi. Samples from systemically infected leaves harvested at 15 dpi were also included in the analysis. Results showed much more profound transcriptomic alterations in resistant plants compared to susceptible ones. Analyses of gene expression profiles reveal deep and extensive transcriptomic alterations in TGR-1551 plants, many of them involving pathogen response-related genes. Overall, data suggested that resistance to WMV in TGR-1551 is associated with a defense response, contrasting with its recessive nature.

ORGANISM(S): Cucumis melo

PROVIDER: GSE30111 | GEO | 2011/10/03

SECONDARY ACCESSION(S): PRJNA143899

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2011-10-02 | E-GEOD-30111 | biostudies-arrayexpress
2011-08-03 | E-GEOD-28653 | biostudies-arrayexpress
2012-03-07 | E-GEOD-30693 | biostudies-arrayexpress
2015-08-06 | E-GEOD-58593 | biostudies-arrayexpress
2011-08-03 | GSE28653 | GEO
2020-09-27 | GSE119398 | GEO
2010-01-29 | GSE18869 | GEO
2008-02-13 | GSE10488 | GEO
2020-02-09 | MTBLS893 | MetaboLights
| PRJNA301624 | ENA