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Barley host response to the direct application of the trichothecene mycotoxin deoxynivalenol

ABSTRACT: Barley florets (cv. Morex) were treated with 2.0 microgram deoxynivalenol per floret via a 10 microliter solution or mock inoculated with water. Samples were collected at 1, 12, 24, and 48 hours after inoculation. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Stephanie A. Gardiner. The equivalent experiment is BB62 at PLEXdb.]

ORGANISM(S): Hordeum vulgare

PROVIDER: GSE33405 | GEO | 2011/11/22

SECONDARY ACCESSION(S): PRJNA149101

REPOSITORIES: GEO

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Barley host response to the direct application of the trichothecene mycotoxin deoxynivalenol

Project description:Barley florets (cv. Morex) were treated with 2.0 microgram deoxynivalenol per floret via a 10 microliter solution or mock inoculated with water. Samples were collected at 1, 12, 24, and 48 hours after inoculation. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Stephanie A. Gardiner. The equivalent experiment is BB62 at PLEXdb.] time: 1 hai - treated or untreated: Deoxynivalenol(3-replications); time: 1 hai - treated or untreated: Water(3-replications); time: 12 hai - treated or untreated: Deoxynivalenol(3-replications); time: 12 hai - treated or untreated: Water(3-replications); time: 24 hai - treated or untreated: Deoxynivalenol(3-replications); time: 24 hai - treated or untreated: Water(3-replications); time: 48 hai - treated or untreated: Deoxynivalenol(3-replications); time: 48 hai - treated or untreated: Water(3-replications)

2011-11-22 | E-GEOD-33405 | biostudies-arrayexpress

Transcriptome analysis of trichothecene-induced gene expression in barley

2011-11-22 | GSE33398 | GEO

Barley cv Morex inoculated with Fusarium graminearum and water as mock control

Project description:Barley cv. Morex inoculated with Fusarium graminearum (isolate Butte 86) or water (mock). Sampled at 24, 48, 72, 96 and 144 hours after treatment. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Jayanand Boddu. The equivalent experiment is BB9 at PLEXdb.]

2011-11-22 | GSE33407 | GEO

Transcriptome analysis of trichothecene-induced gene expression in barley

Project description:Fusarium Head Blight susceptible barley variety, Morex, was infected with deoxynivalenol production deficient mutant strain (GZT40) and wild type stains (Z3639) of Fusarium graminearum. The RNA was sampled at 48 and 96 hours after inoculation. and was used hybridize to Barley_1 GeneChip. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Jayanand Boddu. The equivalent experiment is BB52 at PLEXdb.] time: 48 hai. - Treated or untreated: WATER(3-replications); time: 48 hai. - Treated or untreated: MUTANT(3-replications); time: 48 hai. - Treated or untreated: WILD TYPE(3-replications); time: 96 hai. - Treated or untreated: WATER(3-replications); time: 96 hai. - Treated or untreated: MUTANT(3-replications); time: 96 hai. - Treated or untreated: WILD TYPE(3-replications)

2011-11-22 | E-GEOD-33398 | biostudies-arrayexpress

Structural and functional characterization of a winter malting barley

Project description:Transcriptome comparison of the winter malting barley '88Ab536' with the spring malting variety 'Morex' at two time points of the malting process: 'out of steeping' and '3 days of germination'. Three replicates of each genotype and time point were accomplished. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Maria Munoz-Amatriain. The equivalent experiment is BB76 at PLEXdb.]

2011-11-22 | GSE33842 | GEO

Structural and functional characterization of a winter malting barley

2011-11-22 | E-GEOD-33842 | biostudies-arrayexpress

Transcription profiling of barley Steptoe x Morex seedling leaf comparison

Project description:This study was to collect expression level polymorphism (ELP) data for the barley genotypes Steptoe and Morex, parents of a widely used North American mapping population. Primarily, the data collected will show the amount of variation between these genotypes in seedling leaves grown in a greenhouse at the same time, with replications on three separate dates. -----------------------------------------------------------------------------------------------------------------------; Roger P. Wise(Head of Lab) and Stacy Barkeloo are the original contributors of this experimental data. PLEXdb(www.plexdb.org) has submitted this series at GEO on behalf of them . The equivalent experiment is 'BB16' at PLEXdb. Experiment Overall Design: genotype: Steptoe(3-replications); genotype: Morex(3-replications)

2008-06-18 | E-GEOD-11182 | biostudies-arrayexpress

Genotype-dependent gene expression in barley

Project description:Comparison of mRNA accumulation in the seedling leaves of 8 unstressed barley cultivars ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, . The equivalent experiment is BB20 at PLEXdb.] genotype: Morex(3-replications); genotype: Steptoe(3-replications); genotype: OWB REC(3-replications); genotype: OWB DOM(3-replications); genotype: Barke(3-replications); genotype: Haruna Nijo(3-replications); genotype: Golden Promise(3-replications); genotype: Optic(3-replications)

2011-11-22 | E-GEOD-33393 | biostudies-arrayexpress

Steptoe x Morex seedling leaf comparison

Project description:This study was to collect expression level polymorphism (ELP) data for the barley genotypes Steptoe and Morex, parents of a widely used North American mapping population. Primarily, the data collected will show the amount of variation between these genotypes in seedling leaves grown in a greenhouse at the same time, with replications on three separate dates. ----------------------------------------------------------------------------------------------------------------------- Roger P. Wise(Head of Lab) and Stacy Barkeloo are the original contributors of this experimental data. PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of them . The equivalent experiment is 'BB16' at PLEXdb. Keywords: genotype

2008-05-27 | GSE11182 | GEO

Transcription patterns during wheat development

Project description:The analysis of gene expression during wheat development: Gene expression measurements were carried out on a developmental tissue series for wild-type wheat (cv. Chinese Spring) using the Affymetrix Wheat GeneChip. Thirteen tissues at defined developmental stages were chosen to match the barley (cv. Morex) tissue series of Druka et al. 2006 that used the Affymetrix Barley1 GeneChip. Three replicates of: root tissue at two different developmental stages, leaf, crown, caryopsis, anther, pistil, inflorescence, bracts, mesocotyl, endosperm, embryo and coleoptiles were hybridised. Comparisons between this wheat data and the barley dataset were performed and are available at http://contigcomp.acpfg.com.au [PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Tim Sutton. The equivalent experiment is TA3 at PLEXdb.]

2009-08-11 | GSE12508 | GEO

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